Parental gene:

MCTS1, ENSECAG00000014597

Aliases:None
Description:malignant T cell amplified sequence 1 [Source:HGNC Symbol;Acc:23357]
Organism:Horse (Equus caballus)
Coordinates:X:95832863..95840185(+)


>ENSECAG00000014597
TTCCCAGTTATTGAACCATGGCTTAATCAAATCATGCCTAAGAAAGATCCTGTCAAAATAGTGAGATGCCATGAACATAT
AGAAATCCTTACAGTAAACGGAGAGTTACTATTTTTTAGACAAAGAGAAGGCCCTTTTTATCCAACCCTAAGGTTACTTC
ACAAATATCCTTTTATCCTGCCACACCAACAGGTTGATAAAGGAGCCATCAAATTTGTACTCAGTGGAGCAAATATCATG
TGTCCAGGCTTAACTTCTCCTGGAGCTAAACTTTACCCTGCTGCAGTAGATACGATTGTTGCAATCATGGCAGAAGGAAA
ACAGCATGCTCTGTGTGTTGGAGTCATGAAGATGTCTGCAGAAGATATTGAGAAAGTCAACAAAGGAATTGGCATTGAAA
ATATCCATTATTTAAATGATGGGCTGTGGCATATGAAGACATATAAATGA

Library Parental gene expression (RPM)
SRP021940_articular_cartilage 1 .83 RPM
SRP021940_cerebellum 1 .71 RPM
SRP021940_embryo 2 .48 RPM
SRP021940_placental_villous 2 .84 RPM
SRP021940_synovial_membrane 3 .02 RPM
SRP021940_testis 0 .83 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000005502 ortholog_one2one 1 retrogene
retro_cpor_1411,
Echinops telfairi ENSETEG00000015462 possible_ortholog 1 retrogene
retro_etel_19,
Monodelphis domestica ENSMODG00000010354 ortholog_one2one 1 retrogene
retro_mdom_203,
Mus musculus ENSMUSG00000000355 possible_ortholog 3 retrogenes
retro_mmus_2504, retro_mmus_2505, retro_mmus_69,
Ictidomys tridecemlineatus ENSSTOG00000011496 possible_ortholog 2 retrogenes
retro_itri_1136, retro_itri_1468,
Tupaia belangeri ENSTBEG00000010666 ortholog_one2one 2 retrogenes
retro_tbel_1485, retro_tbel_4265,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_697 93.33 100.00
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Download FASTA sequences of all ENSECAG00000014597 retrocopies