Parental gene: | TUBAL3, ENSECAG00000014631 |
| Aliases: | None |
| Description: | tubulin, alpha-like 3 [Source:HGNC Symbol;Acc:23534] |
| Organism: | Horse (Equus caballus) |
| Coordinates: | 29:28502118..28512025(+) |
>ENSECAG00000014631
TTATTTCAGAGGGAGTGCCTTTCCATTCACATTGGCCAAGCTGGCATCCAGATTGGGGATGCTTGTTGGGAACTCTATTG
CCTGGAACATGGAATCCAGCCAGATGGTGGTTTGGAAAATGCTAACGTGGAGCACATGGATGCATCTTTCGATACCTTCT
TTTGTGAGACCAGAGCTGGGAAGTATGTGCCCAGAGCGCTCTTCATGGACCTGGAGCCAACCGTTGTAGATGGGATCCGT
ACAGGCAAGTACCGCTCACTCTTCCACCCAGAGCAGCTTGTTAGTGGAAAGGAAGATGCTGCAAACAACTACGCCCGAGG
TCACTACTCTGTGGGGTCGGAGATCATCGACCTTGTGCTAGAGAGGATCCGAAAGCTGGCAAAACAGTGCAGTGGACTTC
AAGGATTTTTGATTTTCCGAAGCTTTGGAGGAGGCACTGGCTCAGGATTTACATCTCTGTTAATGGAGCAGCTCTCGATA
GAATATAGCAGGAAGACTAAATTGGAGTTCTCTGTCTATCCAGCCCCTAGGATCTCCACTGCTGTCGTAGAGCCTTACAA
CTCCATCCTCACCACCCATTCCACCATAGAGCACTCAGACTGTTCCTTCATGGTGGACAATGAAGCCATCTTTGACATAT
GCCATCGTAAACTTGGTGTGGAACGCCCCTCTTACGCCAGCATTAATAGGCTGATAGGTCAAGCTGTATCTTCCATTACT
GCATCCCTCCGGTTTAAAGGGCCCTTGAATGTGGACCTAATTGAATTCCAGACCAACCTGGTACCTTATCCGAGAATACA
TTTCCCCATGACCACCTTTGCCCCCATCATCTCTGCTGACAAAGCCTACCACGAGGAGCTCTCCGTGTCAGACATCACTG
CGGCTTGCTTTGAGTTCTCCAACCAGCTGGTCAAGTGTGATCCTCGACTGGGGAAGTACATGGCCTGCTGCCTACTCTAC
AGAGGGGATGTGGTCCCTAAGGATGTGAATGCAGCGATTGCAGCCATGAAGTCAAGGAACTCTGTTCGGTTTGTAGATTG
GTGTCCAACTGGTTTCAAGGTAGGCATCAACAATCAACCCCCCGTGGCGATGCCAGGAGGGGACCTGGCCAAGGTCCAGA
GGGCTGTCTGCATGCTGAGCAACACCACAGCAATTGTGGAGGCGTGGGCCCGCCTGGACCACAAGTTTGACCTCATGTAT
GCCAAGAGGGCATTTCTACATTGGTACATCAGAGAAGGCATGGAAGAAGGCGAGTTCTCAGAAGCCAGGGAAGATTTGGC
AGCCCTGGAGAAGGATTATGAAGAAGTGGGG
TTATTTCAGAGGGAGTGCCTTTCCATTCACATTGGCCAAGCTGGCATCCAGATTGGGGATGCTTGTTGGGAACTCTATTG
CCTGGAACATGGAATCCAGCCAGATGGTGGTTTGGAAAATGCTAACGTGGAGCACATGGATGCATCTTTCGATACCTTCT
TTTGTGAGACCAGAGCTGGGAAGTATGTGCCCAGAGCGCTCTTCATGGACCTGGAGCCAACCGTTGTAGATGGGATCCGT
ACAGGCAAGTACCGCTCACTCTTCCACCCAGAGCAGCTTGTTAGTGGAAAGGAAGATGCTGCAAACAACTACGCCCGAGG
TCACTACTCTGTGGGGTCGGAGATCATCGACCTTGTGCTAGAGAGGATCCGAAAGCTGGCAAAACAGTGCAGTGGACTTC
AAGGATTTTTGATTTTCCGAAGCTTTGGAGGAGGCACTGGCTCAGGATTTACATCTCTGTTAATGGAGCAGCTCTCGATA
GAATATAGCAGGAAGACTAAATTGGAGTTCTCTGTCTATCCAGCCCCTAGGATCTCCACTGCTGTCGTAGAGCCTTACAA
CTCCATCCTCACCACCCATTCCACCATAGAGCACTCAGACTGTTCCTTCATGGTGGACAATGAAGCCATCTTTGACATAT
GCCATCGTAAACTTGGTGTGGAACGCCCCTCTTACGCCAGCATTAATAGGCTGATAGGTCAAGCTGTATCTTCCATTACT
GCATCCCTCCGGTTTAAAGGGCCCTTGAATGTGGACCTAATTGAATTCCAGACCAACCTGGTACCTTATCCGAGAATACA
TTTCCCCATGACCACCTTTGCCCCCATCATCTCTGCTGACAAAGCCTACCACGAGGAGCTCTCCGTGTCAGACATCACTG
CGGCTTGCTTTGAGTTCTCCAACCAGCTGGTCAAGTGTGATCCTCGACTGGGGAAGTACATGGCCTGCTGCCTACTCTAC
AGAGGGGATGTGGTCCCTAAGGATGTGAATGCAGCGATTGCAGCCATGAAGTCAAGGAACTCTGTTCGGTTTGTAGATTG
GTGTCCAACTGGTTTCAAGGTAGGCATCAACAATCAACCCCCCGTGGCGATGCCAGGAGGGGACCTGGCCAAGGTCCAGA
GGGCTGTCTGCATGCTGAGCAACACCACAGCAATTGTGGAGGCGTGGGCCCGCCTGGACCACAAGTTTGACCTCATGTAT
GCCAAGAGGGCATTTCTACATTGGTACATCAGAGAAGGCATGGAAGAAGGCGAGTTCTCAGAAGCCAGGGAAGATTTGGC
AGCCCTGGAGAAGGATTATGAAGAAGTGGGG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_synovial_membrane | 0 .08 RPM |
| SRP021940_embryo | 0 .26 RPM |
| SRP021940_cerebellum | 0 .10 RPM |
| SRP021940_testis | 0 .26 RPM |
| SRP021940_placental_villous | 0 .05 RPM |
| SRP021940_articular_cartilage | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000005248 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000009504 | other_paralog | 1 retrogene | |
| Equus caballus | ENSECAG00000013798 | other_paralog | 1 retrogene | |
| Equus caballus | ENSECAG00000014403 | other_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_147 | 62.41 | 99.08 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSECAG00000014631 retrocopies