Parental gene:

ENSECAG00000014403

Aliases:None
Description:None
Organism:Horse (Equus caballus)
Coordinates:8:11054655..11058755(+)


>ENSECAG00000014403
TTTTCTGGTTTCCAGCGTGAGTGCATCTCTATCCACGTGGGGCAGGCGGGGGTCCAGATCGGCAATGCCTGCTGGGAATT
GTACTGCCTTGAACATGGAATTCAGCCTGATGGTCAGATGCCAAGTGACAAAACCATCGGCGGTGGGGATGACTCATTCA
ACACGTTCTTCAGCGAGACTGGGGCTGGCAAGCACGTTCCCAGAGCTGTGTTTGTGGACCTGGAGCCCACCGTGGTCGAT
GAAGTGCGCACAGGGACCTACAGGCAGCTCTTCCACCCGGAGCAGCTGATCACCGGGAAGGAAGACGCGGCCAATAATTA
CGCCAGAGGCCATTACACCATCGGCAAGGAGATCGTCGACCTGGTCCTGGACCGGATCCGCAAACTGGCGGATCTGTGCA
CGGGGCTGCAGGGCTTCCTCATCTTCCACAGCTTCGGGGGCGGCACCGGCTCTGGGTTTGCGTCTCTGCTCATGGAGCGG
CTCTCCGTGGACTATGGCAAGAAGTCCAAGCTCGAATTTGCCATTTACCCAGCCCCCCAGGTTTCCACGGCTGTGGTGGA
GCCCTACAACTCCATCCTGACCACTCACACGACCCTGGAACATTCTGATTGTGCCTTCATGGTGGACAACGAAGCCATCT
ACGACATATGTCGGCGCAACCTGGATATTGAGCGGCCCACATACACCAACCTCAATCGTCTGATCGGACAGATCGTGTCC
TCCATCACGGCCTCCCTGCGGTTCGATGGGGCCCTGAATGTGGACTTGACGGAATTCCAGACCAACCTGGTCCCGTACCC
CCGCATCCACTTCCCGCTGGCCACCTACGCCCCGGTTATCTCAGCCGAGAAGGCCTACCATGAGCAGCTGTCTGTGGCCG
AGATCACCAATGCCTGCTTCGAGCCGGCCAACCAGATGGTCAAGTGTGACCCTCGCCATGGCAAGTACATGGCCTGCTGT
ATGTTGTACAGGGGCGACGTGGTCCCGAAAGATGTCAACGCGGCCATCGCCACCATCAAGACCAAGCGCACCATCCAGTT
TGTGGATTGGTGCCCGACTGGATTTAAGGTGGGCATCAACTACCAGCCCCCCACGGTTGTGCCCGGGGGAGACCTGGCCA
AGGTGCAGCGGGCAGTGTGCATGCTGAGCAACACCACCGCCATCGCCGAGGCCTGGGCCCGCCTGGACCATAAGTTCGAT
CTCATGTACGCAAAGCGAGCCTTTGTGCACTGGTACGTGGGGGAAGGCATGGAGGAAGGAGAGTTCTCTGAGGCCCGGGA
GGACCTGGCGGCGCTGGAGAAGGACTACGAAGAGGTGGGCGTGGACTCCGTGGAAGCCGAGGCCGAAGAAGGGGAAGAAT
ACTGA

Library Parental gene expression (RPM)
SRP021940_synovial_membrane 0 .00 RPM
SRP021940_embryo 0 .03 RPM
SRP021940_cerebellum 0 .00 RPM
SRP021940_testis 537 .00 RPM
SRP021940_placental_villous 0 .34 RPM
SRP021940_articular_cartilage 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011042 ortholog_one2many 2 retrogenes
retro_amel_488, retro_amel_518,
Equus caballus ENSECAG00000009504 within_species_paralog 1 retrogene
retro_ecab_1041,
Equus caballus ENSECAG00000013798 within_species_paralog 1 retrogene
retro_ecab_223,
Equus caballus ENSECAG00000014631 other_paralog 1 retrogene
retro_ecab_147,
Felis catus ENSFCAG00000022091 ortholog_one2many 2 retrogenes
retro_fcat_1375, retro_fcat_647,
Monodelphis domestica ENSMODG00000023336 possible_ortholog 1 retrogene
retro_mdom_973,
Mustela putorius furo ENSMPUG00000003660 possible_ortholog 1 retrogene
retro_mputfur_130,
Mus musculus ENSMUSG00000067338 possible_ortholog 1 retrogene
retro_mmus_3356,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_318 64.41 98.90
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Download FASTA sequences of all ENSECAG00000014403 retrocopies