Parental gene:

MAX, ENSEEUG00000003973

Aliases:None
Description:MYC associated factor X [Source:HGNC Symbol;Acc:6913]
Organism:Hedgehog (Erinaceus europaeus)
Coordinates:GeneScaffold_3268:63129..89319(-)


>ENSEEUG00000003973
GCTGACAAACGGGCTCATCATAATGCACTGGAACGAAAACGTAGGGACCACATCAAAGACAGCTTTCACAGTTTGCGGGA
CTCGGTCCCATCACTCCAAGGAGAAAAGGCATCCCGGGCCCAAATCCTAGACAAAGCCACAGAATATATCCAGTATATGC
GAAGGAAAAACCACACACACCAGCAAGATATTGACGACCTCAAGCGGCAGAATGCTCTTCTAGAGCAGCAAGTCCGTGCA
CTGGAGAAGGCGAGGTCAAGTGCCCAACTGCAGACCAACTACCCCTCCTCAGACAGCCTCTACACCAACGCCAAGGGCAG
CACCATCTCTTTCGATGGAGGCTCAGACTCCAGCTCAGAGTCAGAGCCTGAAGAGCCCCAAAGCAGGAAGAAGCTCCTGA
TGGAGGCCAGCTAA

Library Parental gene expression (RPM)
SRP017611_brain 19 .18 RPM
SRP017611_kidney 19 .13 RPM
SRP017611_liver 8 .68 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000003472 ortholog_one2one 2 retrogenes
retro_amel_1261, retro_amel_1606,
Canis familiaris ENSCAFG00000016212 ortholog_one2one 2 retrogenes
retro_cfam_1179, retro_cfam_1325,
Callithrix jacchus ENSCJAG00000019702 ortholog_one2one 2 retrogenes
retro_cjac_2057, retro_cjac_2556,
Cavia porcellus ENSCPOG00000010172 ortholog_one2one 1 retrogene
retro_cpor_710,
Echinops telfairi ENSETEG00000002967 ortholog_one2one 1 retrogene
retro_etel_1294,
Felis catus ENSFCAG00000010347 ortholog_one2one 1 retrogene
retro_fcat_278,
Macaca mulatta ENSMMUG00000004341 ortholog_one2one 1 retrogene
retro_mmul_1648,
Mustela putorius furo ENSMPUG00000006859 ortholog_one2one 3 retrogenes
retro_mputfur_1218, retro_mputfur_1615, retro_mputfur_192,
Mus musculus ENSMUSG00000059436 ortholog_one2one 8 retrogenes
retro_mmus_2891, retro_mmus_2892, retro_mmus_2893, retro_mmus_2894, retro_mmus_2991, retro_mmus_2992, retro_mmus_2993, retro_mmus_2994,
Nomascus leucogenys ENSNLEG00000014373 ortholog_one2one 1 retrogene
retro_nleu_1122,
Ochotona princeps ENSOPRG00000016245 ortholog_one2one 1 retrogene
retro_opri_945,
Pongo abelii ENSPPYG00000005911 ortholog_one2one 1 retrogene
retro_pabe_3097,
Rattus norvegicus ENSRNOG00000008049 ortholog_one2one 3 retrogenes
retro_rnor_1653, retro_rnor_1877, retro_rnor_2369,
Ictidomys tridecemlineatus ENSSTOG00000028142 ortholog_one2many 1 retrogene
retro_itri_42,
Tupaia belangeri ENSTBEG00000012645 ortholog_one2one 1 retrogene
retro_tbel_3407,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_eeur_37 62.50 70.07
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2. retro_eeur_216 89.47 80.29
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3. retro_eeur_344 62.86 75.91
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Download FASTA sequences of all ENSEEUG00000003973 retrocopies