Parental gene: | TFAM, ENSEEUG00000006119 |
| Aliases: | None |
| Description: | transcription factor A, mitochondrial [Source:HGNC Symbol;Acc:11741] |
| Organism: | Hedgehog (Erinaceus europaeus) |
| Coordinates: | GeneScaffold_1981:3672..11379(+) |
>ENSEEUG00000006119
GTATATGAAGATGCTTACAAGGCAGACTGGGAGTCATACAAAGAAGAGATGAACAGACTGCAGAAAAATCTAACACCAAG
TCAAATCGAATCTTTGGAAAAAGAAGTCTTGCAGAAACGTTTAAAAAAGAAGGCAATAATCAAAAAGAGAGAGTTGACAA
TGCTTGGGAAACCGAAAAGACCTCGCACGGCTCATAACATCTTTGTTTCTGAAAGATTCCAAGAAGCTAAGGACTTGTCA
GTACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGTATATTCAACTTGC
TGAAGATGATAAAGTTCGATATTATAATGAAATGAAAGTTTGGGAAGACCAGATGATTGAAGCCGGGCGGAATGATCTTC
TACGTCGCAGACCAAAGTCCTCAAAAGAT
GTATATGAAGATGCTTACAAGGCAGACTGGGAGTCATACAAAGAAGAGATGAACAGACTGCAGAAAAATCTAACACCAAG
TCAAATCGAATCTTTGGAAAAAGAAGTCTTGCAGAAACGTTTAAAAAAGAAGGCAATAATCAAAAAGAGAGAGTTGACAA
TGCTTGGGAAACCGAAAAGACCTCGCACGGCTCATAACATCTTTGTTTCTGAAAGATTCCAAGAAGCTAAGGACTTGTCA
GTACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGTATATTCAACTTGC
TGAAGATGATAAAGTTCGATATTATAATGAAATGAAAGTTTGGGAAGACCAGATGATTGAAGCCGGGCGGAATGATCTTC
TACGTCGCAGACCAAAGTCCTCAAAAGAT
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 11 .90 RPM |
| SRP017611_kidney | 12 .57 RPM |
| SRP017611_brain | 6 .28 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dasypus novemcinctus | ENSDNOG00000000535 | ortholog_one2one | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000014013 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000108064 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000004948 | ortholog_one2one | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000012891 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000008802 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000019829 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000012295 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000014405 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000002430 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000002519 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000000613 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000009246 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_eeur_103 | 68.18 | 76.92 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_eeur_182 | 76.92 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_eeur_652 | 76.92 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSEEUG00000006119 retrocopies