Parental gene:

TFAM, ENSOCUG00000014405

Aliases:None
Description:transcription factor A, mitochondrial [Source:HGNC Symbol;Acc:11741]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:18:27751887..27765336(-)


>ENSOCUG00000014405
TGTGGGAGTCGACTGCGCCTCACCTTTCAGTGTAGTTTTTCGTATATTCCGAGATGGTGTTCATCCACCTTTGGCAGCTA
TCCAAAGAAACCTATGACTTCATACCTTCGATTTTCTAAAGAACAGTTACCCATATTTAAAGCTAAGAACCCAGAGGCAA
AAAATTCAGAGCTAATTAAAAGAATTGCCGAGCTGTGGAGGGAACTTCCTGATTCAGAGAAAAAGGTATATGAAGATGCT
TACAGGGTAGAGTGGGAGGCCTACAAAGAAGAGATTAGCAGAATTCAAGAACATCTAACTCCAAGTCAGATGCTATCTAT
GGAAAAAGAAATCATGCAAAAACGTTTAAAAAAGAAAGCATTAATGAAAAAGAGAGAGTTAACAATGCTTGGAAAACCAA
AAAGACCTCGCTCAGCTTATAACATTTTTGTATCTGAAAGTTTCCAAGAAGCTAAAGATGGTTCATCACAGGCAAAGCTG
AAGGCTGTAAATGATAACTGGAAAAATCTGCCTAGTTCTCAAAAACAAGTATATATTCAACTTGCTAAAGATGATAAAAT
TCGTTATGATAATGAAATGAAATCTTGGGAAGAACAAATGGTTGAAGTTGGACGAAGTGATCTTATACGTCGCAAAATGA
TGCACCATGCAAAAGATGGATCTGAGGAGAGTTAA

Library Parental gene expression (RPM)
SRP017611_brain 26 .21 RPM
SRP017611_kidney 31 .42 RPM
SRP017611_liver 13 .57 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000000535 ortholog_one2one 1 retrogene
retro_dnov_536,
Dipodomys ordii ENSDORG00000014013 ortholog_one2one 2 retrogenes
retro_dord_415, retro_dord_691,
Erinaceus europaeus ENSEEUG00000006119 ortholog_one2one 3 retrogenes
retro_eeur_103, retro_eeur_182, retro_eeur_652,
Homo sapiens ENSG00000108064 ortholog_one2one 2 retrogenes
retro_hsap_3692, retro_hsap_923,
Gorilla gorilla ENSGGOG00000004948 ortholog_one2one 2 retrogenes
retro_ggor_2496, retro_ggor_745,
Loxodonta africana ENSLAFG00000012891 ortholog_one2one 1 retrogene
retro_lafr_1164,
Macropus eugenii ENSMEUG00000008802 ortholog_one2one 1 retrogene
retro_meug_190,
Macaca mulatta ENSMMUG00000019829 ortholog_one2one 1 retrogene
retro_mmul_1121,
Nomascus leucogenys ENSNLEG00000012295 ortholog_one2one 2 retrogenes
retro_nleu_2827, retro_nleu_288,
Pongo abelii ENSPPYG00000002430 ortholog_one2one 2 retrogenes
retro_pabe_3042, retro_pabe_796,
Pan troglodytes ENSPTRG00000002519 ortholog_one2one 1 retrogene
retro_ptro_641,
Rattus norvegicus ENSRNOG00000000613 ortholog_one2one 1 retrogene
retro_rnor_1936,
Tursiops truncatus ENSTTRG00000009246 ortholog_one2one 1 retrogene
retro_ttru_1763,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_1278 68.70 58.04
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Download FASTA sequences of all ENSOCUG00000014405 retrocopies