Parental gene:

SLC5A2, ENSFCAG00000001380

Aliases:None
Description:solute carrier family 5 (sodium/glucose cotransporter), member 2 [Source:HGNC Symbol;Acc:11037]
Organism:Cat (Felis catus)
Coordinates:E3:19258870..19264791(-)


>ENSFCAG00000001380
CTAGAGGGACAGATCCTAGGCAGAATGGAGGAACACATGGAGGCAGGCTCCGCACCAGGACTGGGAAACCAGAGGGTCCT
AATTAACAACCTTGCTGACATCCTGGTCATTGCTGCTTATTTCCTGTTGGTCATTGGTGTCGGCTTGTGGTCCATGTGCA
GAACCAACAGAGGCACCGTTGGCGGCTACTTCCTCGCGGGACGAAGCATGGTGTGGTGGCCGGTCGGGGCCTCTCTCTTT
GCCAGCAACATCGGCAGTGGCCACTTTGTGGGCCTCGCAGGGACCGGTGCTGCAAGCGGCTTGGCTGTGGCTGGATTTGA
GTGGAATGCGCTGTTCGTGGTGCTATTGCTCGGCTGGCTCTTCGCGCCCGTGTACCTGACTGCGGGTGTTATTACCATGC
CACAGTACCTGCGCAAGCGCTTCGGAGGCCATCGTATTCGCCTCTACCTGTCAGTGCTCTCGCTTTTTCTGTACATCTTC
ACCAAGATTTCGGTGGACATGTTCTCCGGGGCAGTATTCATTCAACAGGCTCTGGGCTGGAACATCTATGCCTCCGTCAT
TGCCCTTCTGGGCATCACCATGATCTACACTGTGACAGGAGGGCTGGCAGCGCTGATGTACACGGATACTCTGCAGACTT
TCGTCATTCTTGGTGGGGCCTTCGTCCTCATGGGTTACGCCTTCCACGAGGTGGGCGGGTATTCGGGGCTTTTCGACAAA
TACTTGGGGGCAATGACGTCGCTGACGGTTTCTGAGGATCCGGCTGTGGGCAACATCTCGAGTTCCTGCTATCGACCCCG
GCCCGACTCCTACCACCTGCTCCGGGACGCTGTGACAGGGGACTTGCCGTGGCCTGCACTGCTCCTGGGTCTTACCATCG
TCTCAGGCTGGTACTGGTGCAGCGACCAGGTCATTGTGCAGCGCTGTCTGGCCGGGAAGAACCTGACTCACATCAAGGCG
GGCTGCATACTGTGCGGCTACTTGAAGCTGATGCCCATGTTCCTCATGGTCATGCCAGGCATGATCAGCCGCATTCTTTA
TCCGGATGAGGTGGCGTGCGTGGTGCCCGAGGTGTGTAAGCGTGTGTGCGGTACTGAGGTGGGCTGCTCCAACATTGCGT
ACCCGCGGCTGGTCGTGAAACTCATGCCCAATGGTTTGCGTGGACTCATGCTGGCGGTCATGCTGGCTGCGCTCATGTCC
TCACTGGCCTCCATCTTTAACAGCAGCAGCACGCTTTTCACCATGGATATCTACATGCGCCTGCGGCCCCACGCAGGGGA
CCGTGAGCTGCTGCTAGTAGGACGGCTCTGGGTGGTGTTTATTGTGGCTGTGTCAGTGGCCTGGCTACCCGTGGTGCAGG
CAGCGCAGGGAGGGCAGCTCTTTGATTACATCCAGGCAGTGTCCAGCTACCTGGCGCCACCTGTGTCTGCTGTCTTTGTG
CTGGCGCTCTTTGTGCCCCGTGTCAATGAGAAGGGTGCCTTCTGGGGACTGATTGGGGGCCTGTTTATGGGTCTGGCACG
CCTTATTCCCGAGTTCTCCTTTGGCTCGGGCAGCTGTGTACGACCCTCCACATGCCCAGCACTCTTCTGCCGTGTGCACT
ACCTCTACTTTGCCATTGTGCTCTTCGTCTGCTCTGGCCTCCTCATCCTTGTAGTATCACTGTGCACAGCACCTATCCCA
CGCAAGCATCTCCACCGCCTGGTTTTCAGTTTACGGCACAGCAAGGAGCAGCGGGAGGACCTGGATGCCGATGAGCTAGA
AGGTTCAACTTCACCCCCTGTACAGAATGGGTGTCCTGAACATGCAGTGGAGATGGAGGAGCCCCAGTCCCCAACACCGG
GCATGTTCCGCCGGTGCCTGCTCTGGTTCTGTGGAATGAGCGGGAGTGGGGCAGGTAGTCCCCCAGCCCCTACCCAGGAG
GAAGTGGCTGCAGCAGCCAGGCGGCTGGAGGACATCAGTGAGGACTCGAGTTGGGCCCGTGTGGTCAACTTCAATGCCCT
GCTAATGATGGCCGTGGCCACGTTCCTCTGGGGCTTTTATGCCTGA

Library Parental gene expression (RPM)
SRP017611_brain 0 .23 RPM
SRP017611_kidney 418 .93 RPM
SRP017611_liver 0 .30 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000011926 ortholog_one2one 1 retrogene
retro_acar_109,
Ailuropoda melanoleuca ENSAMEG00000016218 ortholog_one2one 1 retrogene
retro_amel_32,
Bos taurus ENSBTAG00000010096 ortholog_one2one 1 retrogene
retro_btau_287,
Canis familiaris ENSCAFG00000016909 ortholog_one2one 1 retrogene
retro_cfam_157,
Latimeria chalumnae ENSLACG00000007334 ortholog_one2one 1 retrogene
retro_lcha_35,
Loxodonta africana ENSLAFG00000005737 ortholog_one2one 1 retrogene
retro_lafr_54,
Myotis lucifugus ENSMLUG00000011500 ortholog_one2one 1 retrogene
retro_mluc_218,
Mus musculus ENSMUSG00000030781 ortholog_one2one 1 retrogene
retro_mmus_200,
Pteropus vampyrus ENSPVAG00000012531 ortholog_one2one 1 retrogene
retro_pvam_13,
Tursiops truncatus ENSTTRG00000012500 ortholog_one2one 1 retrogene
retro_ttru_2,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_110 51.53 81.35
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Download FASTA sequences of all ENSFCAG00000001380 retrocopies