Parental gene:

ENSFCAG00000007057

Aliases:None
Description:None
Organism:Cat (Felis catus)
Coordinates:X:96798066..96800675(+)


>ENSFCAG00000007057
CCCCGCACTCCCGGAGTCCCAGCCGGTTCCTACCGCAGTCCCGCAGTCGCCCGGCTCCTCTTTCCTTTCAAAATGACAGA
TGCCGCTGTGTCCTTCGCCAAGGACTTCCTGGCGGGTGGAGTGGCGGCGGCCTTTCCCTCCTCCGCGGTTGTAACTCTCC
CTGTTGGCCTCCTTGTCTATCAGGTGCAGCATGCCAGCAAGCAAATCACCGCAGATAAGCAATACAAGGGCATCATAGAC
TGCGTGGTTCGTATCCCCAAGGAGCAGGGAGTCCTGTCCTTCTGGCGCGGTAACCTGGCCAATGTCATCAGATACTTCCC
CACCCAGGCCCTCAACTTCGCCTTCAAAGATAAATACAAGCAGATCTTCCTGGGTGGCGTGGACAAGAGAACCCAGTTTT
GGCGCTACTTTGCAGGGAATCTGGCATCGGGTGGCGCCGCTGGGGCCACATCCTTGTGTTTTGTGTATCCTCTGGATTTT
GCCCGTACCCGTCTAGCGGCCGATGTGGGCAAAGCCGGAGCGGAAAGGGAATTCCGAGGCCTTGGTGACTGCCTGGTTAA
GATCTACAAATCTGATGGGATTAAGGGCCTGTACCAAGGCTTTAATGTGTCTGTGCAGGGCATTATCATCTACCGAGCTG
CCTACTTCGGTATCTATGATACCGCAAAGGGCATGCTTCCGGATCCCAAGAACACTCACATCTTCATCAGCTGGATGATC
GCACAGTCCGTCACAGCGGTTGCCGGGTTGACTTCCTATCCCTTTGACACTGTTCGTCGCCGAATGATGATGCAGTCGGG
GCGCAAAGGAACCGACATCATGTACACAGGCACGCTTGACTGCTGGAGGAAGATTGCTCGTGACGAAGGGGCCAAAGCTT
TTTTCAAGGGGGCGTGGTCCAATGTTCTCAGAGGCATGGGTGGTGCCTTCGTGCTTGTCTTGTATGATGAAATCAAGAAG
TTCACATAA

Library Parental gene expression (RPM)
SRP017611_brain 47 .52 RPM
SRP017611_kidney 460 .05 RPM
SRP017611_liver 61 .36 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000000143 ortholog_one2many 1 retrogene
retro_amel_1291,
Callithrix jacchus ENSCJAG00000005125 ortholog_many2many 1 retrogene
retro_cjac_373,
Dasypus novemcinctus ENSDNOG00000008384 ortholog_one2many 1 retrogene
retro_dnov_1894,
Echinops telfairi ENSETEG00000004900 ortholog_many2many 2 retrogenes
retro_etel_23, retro_etel_48,
Homo sapiens ENSG00000005022 ortholog_one2many 7 retrogenes
retro_hsap_2243, retro_hsap_3132, retro_hsap_3336, retro_hsap_3516, retro_hsap_3715, retro_hsap_3730, retro_hsap_4239,
Gorilla gorilla ENSGGOG00000014279 ortholog_many2many 8 retrogenes
retro_ggor_1673, retro_ggor_1674, retro_ggor_2146, retro_ggor_2377, retro_ggor_2512, retro_ggor_2517, retro_ggor_2840, retro_ggor_941,
Loxodonta africana ENSLAFG00000029398 ortholog_one2many 1 retrogene
retro_lafr_844,
Microcebus murinus ENSMICG00000002757 ortholog_one2many 3 retrogenes
retro_mmur_322, retro_mmur_411, retro_mmur_974,
Macaca mulatta ENSMMUG00000022663 ortholog_many2many 6 retrogenes
retro_mmul_1022, retro_mmul_1287, retro_mmul_1699, retro_mmul_1775, retro_mmul_1800, retro_mmul_2090,
Mus musculus ENSMUSG00000016319 possible_ortholog 4 retrogenes
retro_mmus_1173, retro_mmus_1955, retro_mmus_2589, retro_mmus_459,
Nomascus leucogenys ENSNLEG00000014852 ortholog_one2many 7 retrogenes
retro_nleu_131, retro_nleu_1314, retro_nleu_1383, retro_nleu_1679, retro_nleu_2253, retro_nleu_2560, retro_nleu_3105,
Oryctolagus cuniculus ENSOCUG00000013268 ortholog_one2many 11 retrogenes
retro_ocun_1002, retro_ocun_1233, retro_ocun_1457, retro_ocun_1694, retro_ocun_1705, retro_ocun_1862, retro_ocun_1877, retro_ocun_1890, retro_ocun_1932, retro_ocun_610, retro_ocun_708,
Otolemur garnettii ENSOGAG00000010008 ortholog_many2many 7 retrogenes
retro_ogar_1131, retro_ogar_1275, retro_ogar_1669, retro_ogar_2161, retro_ogar_2408, retro_ogar_2450, retro_ogar_2474,
Pongo abelii ENSPPYG00000020669 ortholog_one2many 5 retrogenes
retro_pabe_1006, retro_pabe_2587, retro_pabe_3130, retro_pabe_3141, retro_pabe_3398,
Rattus norvegicus ENSRNOG00000039980 possible_ortholog 11 retrogenes
retro_rnor_1242, retro_rnor_1364, retro_rnor_1475, retro_rnor_1612, retro_rnor_1904, retro_rnor_1922, retro_rnor_2533, retro_rnor_2758, retro_rnor_721, retro_rnor_722, retro_rnor_723,
Ictidomys tridecemlineatus ENSSTOG00000020438 ortholog_one2many 3 retrogenes
retro_itri_314, retro_itri_532, retro_itri_868,
Tupaia belangeri ENSTBEG00000006008 possible_ortholog 4 retrogenes
retro_tbel_1558, retro_tbel_1860, retro_tbel_4654, retro_tbel_4661,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_127 87.58 92.55
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2. retro_fcat_1035 78.49 52.48
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Download FASTA sequences of all ENSFCAG00000007057 retrocopies