Parental gene:

TSPAN3, ENSFCAG00000025746

Aliases:None
Description:tetraspanin 3 [Source:HGNC Symbol;Acc:17752]
Organism:Cat (Felis catus)
Coordinates:B3:31986674..32018232(-)


>ENSFCAG00000025746
AGAGGAGAATGCATCATTCTAAAGAACAAATCAATTATTATATTTTCTTTTTCCCAGTGGGGGGCAGCTGGCATTTTATG
CTATGTGGGAGCCTATGTCTTTATCACTTACGATGACTATGACCACTTCTTTGAAGATGTGTACACTCTCATCCCTGCTG
TAGTGATCATAGCTGTAGGAGCCCTGCTTTTCATCATTGGGCTAATTGGCTGCTGTGCCACAATCCGAGAAAGCCGCTGC
GGACTTGCCACATTTGTCATCATCCTCCTTTTGGTTTTTGTCACAGAAGTTGTTGTAGTGGTTTTGGGATACATTTACAG
AGCAAAGGTGGAAAATGAAGTTGACCGCAGCATTCAGAAAGTGTATAAGACCTATAATGGAACGAACCCTGATGCTGCTA
GCCGGGCTATTGATTATGTTCAGAGACAGCTGCACTGTTGTGGAATTCACAACTATTCAGACTGGGAAAATACAGACTGG
TTCAAAGAAACCAAAAACCAGAGTGTCCCTCTTAGCTGCTGCAGAGAGACCGCCAGCAGCTGTAATGGCAGTCTGGCCCA
CCCCTCTGACCTCTATGCTGAGGGATGTGAAGCTCTAGTTGTGAAGAAGCTACAAGAAATCATGATGCATGTTATCTGGG
CAGCACTGGCATTTGCAGCTATTCAGCTGCTGGGCATGCTGTGTGCATGCATCGTATTGTGCAGAAGGAGTAGAGATCCT
GCTTATGAGCTCCTCATCACCGGTGGAACCTATGCATAG

Library Parental gene expression (RPM)
SRP017611_brain 213 .48 RPM
SRP017611_kidney 149 .95 RPM
SRP017611_liver 22 .85 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000009727 ortholog_one2one 1 retrogene
retro_amel_1275,
Bos taurus ENSBTAG00000002415 ortholog_one2one 2 retrogenes
retro_btau_1089, retro_btau_1650,
Canis familiaris ENSCAFG00000018068 ortholog_one2one 2 retrogenes
retro_cfam_1391, retro_cfam_571,
Choloepus hoffmanni ENSCHOG00000003785 ortholog_one2one 2 retrogenes
retro_chof_162, retro_chof_1682,
Dasypus novemcinctus ENSDNOG00000005619 ortholog_one2one 3 retrogenes
retro_dnov_1371, retro_dnov_1520, retro_dnov_1616,
Echinops telfairi ENSETEG00000010916 ortholog_one2one 1 retrogene
retro_etel_872,
Mustela putorius furo ENSMPUG00000017332 ortholog_one2one 2 retrogenes
retro_mputfur_1641, retro_mputfur_1651,
Pteropus vampyrus ENSPVAG00000004662 ortholog_one2one 1 retrogene
retro_pvam_394,
Ictidomys tridecemlineatus ENSSTOG00000005615 ortholog_one2one 1 retrogene
retro_itri_1268,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_1860 72.59 57.76
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Download FASTA sequences of all ENSFCAG00000025746 retrocopies