Parental gene: | DDX50, ENSG00000107625 |
| Aliases: | DDX50, GU2, GUB, RH-II/GuB, mcdrh |
| Description: | DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 [Source:HGNC Symbol;Acc:17906] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 10:70661033..70706603(+) |
>ENSG00000107625
ATGCCTGGGAAACTCCTCTGGGGGGACATTATGGAGCTGGAAGCACCCTTGGAGGAGTCCGAGAGCCAGAAGAAGGAGAG
GCAAAAGAGTGACAGAAGGAAGTCAAGGCACCATTATGACTCGGATGAGAAATCAGAAACAAGAGAAAATGGTGTTACAG
ATGACCTGGATGCTCCCAAGGCCAAAAAATCTAAAATGAAAGAGAAGCTAAATGGAGACACTGAAGAAGGATTTAATAGA
CTTTCAGATGAATTCTCCAAATCTCATAAGTCAAGAAGAAAAGATCTACCAAATGGAGATATAGATGAATATGAAAAAAA
ATCAAAGCGAGTATCATCTTTAGATACTTCTACTCATAAATCAAGTGATAATAAACTAGAGGAGACCTTAACACGTGAAC
AGAAAGAAGGAGCCTTCTCCAATTTTCCTATTTCTGAAGAGACTATAAAGCTTCTGAAAGGTCGAGGGGTAACATATCTC
TTTCCTATTCAAGTTAAGACCTTTGGTCCTGTATATGAAGGAAAAGATTTAATAGCTCAAGCACGGACAGGAACAGGAAA
GACATTCTCTTTTGCCATCCCCTTAATTGAAAGACTCCAAAGAAATCAAGAAACAATTAAAAAAAGCCGCTCACCAAAGG
TACTTGTTTTGGCTCCAACAAGGGAACTGGCAAACCAAGTAGCCAAAGACTTCAAAGATATAACTAGGAAACTCAGCGTG
GCGTGTTTTTATGGTGGAACATCATATCAAAGCCAAATTAATCATATTCGAAATGGTATTGACATCTTGGTTGGAACACC
TGGTCGTATCAAAGACCATCTGCAGAGTGGCCGATTGGATCTTTCTAAACTGCGACATGTTGTGCTTGATGAAGTGGATC
AGATGTTAGATTTAGGTTTCGCTGAACAAGTTGAAGATATTATTCATGAATCCTACAAAACTGATTCTGAAGACAATCCT
CAGACTTTACTTTTTTCTGCAACTTGCCCACAGTGGGTATACAAAGTTGCAAAAAAATACATGAAATCCAGATATGAACA
GGTTGACCTTGTTGGAAAAATGACTCAAAAGGCTGCAACTACTGTGGAACATTTGGCCATCCAGTGTCATTGGTCTCAGA
GGCCAGCAGTTATTGGAGATGTCCTTCAAGTCTACAGTGGGTCTGAAGGGAGGGCTATTATTTTCTGTGAGACCAAGAAG
AATGTAACTGAAATGGCCATGAATCCACACATAAAACAGAATGCCCAGTGTTTACATGGGGACATTGCACAGTCACAAAG
AGAAATTACACTAAAAGGCTTCAGAGAAGGTAGTTTTAAAGTTTTGGTGGCAACCAATGTGGCTGCCCGTGGTTTGGACA
TTCCTGAAGTTGACCTGGTGATTCAAAGTTCTCCTCCTCAGGATGTTGAGTCCTATATCCATCGCTCTGGACGCACAGGT
AGAGCTGGACGGACAGGGATTTGTATATGTTTTTATCAACCAAGAGAAAGAGGTCAACTAAGATATGTGGAACAAAAAGC
AGGAATTACTTTTAAACGTGTAGGTGTTCCTTCTACAATGGATTTAGTTAAATCTAAAAGCATGGATGCCATCAGGTCTC
TGGCTTCCGTTTCTTACGCTGCTGTTGATTTTTTCCGACCATCAGCTCAGAGACTGATAGAAGAGAAAGGTGCAGTGGAT
GCATTGGCTGCAGCTTTAGCCCACATTTCTGGTGCATCAAGCTTTGAACCACGATCTTTGATCACCTCTGATAAGGGGTT
TGTGACCATGACTCTGGAAAGCCTAGAGGAAATACAGGATGTCAGCTGTGCTTGGAAAGAACTTAACAGAAAGCTGAGTA
GTAATGCAGTGTCTCAGATTACCAGAATGTGCCTCCTGAAAGGAAATATGGGTGTTTGCTTTGATGTTCCTACAACTGAG
TCAGAAAGGTTACAGGCAGAGTGGCATGATTCCGACTGGATACTCTCAGTGCCAGCCAAATTACCTGAAATTGAAGAATA
TTATGATGGAAACACATCTTCTAATTCCAGACAGAGGAGTGGCTGGTCAAGTGGTCGATCAGGCCGGTCAGGCCGGTCAG
GTGGTCGATCTGGCGGCCGGTCAGGTAGACAGAGTCGACAAGGAAGTCGCTCAGGAAGTCGACAAGATGGTAGAAGACGA
AGTGGGAATAGAAATCGATCAAGAAGTGGGGGCCACAAACGGAGTTTTGACTGA
ATGCCTGGGAAACTCCTCTGGGGGGACATTATGGAGCTGGAAGCACCCTTGGAGGAGTCCGAGAGCCAGAAGAAGGAGAG
GCAAAAGAGTGACAGAAGGAAGTCAAGGCACCATTATGACTCGGATGAGAAATCAGAAACAAGAGAAAATGGTGTTACAG
ATGACCTGGATGCTCCCAAGGCCAAAAAATCTAAAATGAAAGAGAAGCTAAATGGAGACACTGAAGAAGGATTTAATAGA
CTTTCAGATGAATTCTCCAAATCTCATAAGTCAAGAAGAAAAGATCTACCAAATGGAGATATAGATGAATATGAAAAAAA
ATCAAAGCGAGTATCATCTTTAGATACTTCTACTCATAAATCAAGTGATAATAAACTAGAGGAGACCTTAACACGTGAAC
AGAAAGAAGGAGCCTTCTCCAATTTTCCTATTTCTGAAGAGACTATAAAGCTTCTGAAAGGTCGAGGGGTAACATATCTC
TTTCCTATTCAAGTTAAGACCTTTGGTCCTGTATATGAAGGAAAAGATTTAATAGCTCAAGCACGGACAGGAACAGGAAA
GACATTCTCTTTTGCCATCCCCTTAATTGAAAGACTCCAAAGAAATCAAGAAACAATTAAAAAAAGCCGCTCACCAAAGG
TACTTGTTTTGGCTCCAACAAGGGAACTGGCAAACCAAGTAGCCAAAGACTTCAAAGATATAACTAGGAAACTCAGCGTG
GCGTGTTTTTATGGTGGAACATCATATCAAAGCCAAATTAATCATATTCGAAATGGTATTGACATCTTGGTTGGAACACC
TGGTCGTATCAAAGACCATCTGCAGAGTGGCCGATTGGATCTTTCTAAACTGCGACATGTTGTGCTTGATGAAGTGGATC
AGATGTTAGATTTAGGTTTCGCTGAACAAGTTGAAGATATTATTCATGAATCCTACAAAACTGATTCTGAAGACAATCCT
CAGACTTTACTTTTTTCTGCAACTTGCCCACAGTGGGTATACAAAGTTGCAAAAAAATACATGAAATCCAGATATGAACA
GGTTGACCTTGTTGGAAAAATGACTCAAAAGGCTGCAACTACTGTGGAACATTTGGCCATCCAGTGTCATTGGTCTCAGA
GGCCAGCAGTTATTGGAGATGTCCTTCAAGTCTACAGTGGGTCTGAAGGGAGGGCTATTATTTTCTGTGAGACCAAGAAG
AATGTAACTGAAATGGCCATGAATCCACACATAAAACAGAATGCCCAGTGTTTACATGGGGACATTGCACAGTCACAAAG
AGAAATTACACTAAAAGGCTTCAGAGAAGGTAGTTTTAAAGTTTTGGTGGCAACCAATGTGGCTGCCCGTGGTTTGGACA
TTCCTGAAGTTGACCTGGTGATTCAAAGTTCTCCTCCTCAGGATGTTGAGTCCTATATCCATCGCTCTGGACGCACAGGT
AGAGCTGGACGGACAGGGATTTGTATATGTTTTTATCAACCAAGAGAAAGAGGTCAACTAAGATATGTGGAACAAAAAGC
AGGAATTACTTTTAAACGTGTAGGTGTTCCTTCTACAATGGATTTAGTTAAATCTAAAAGCATGGATGCCATCAGGTCTC
TGGCTTCCGTTTCTTACGCTGCTGTTGATTTTTTCCGACCATCAGCTCAGAGACTGATAGAAGAGAAAGGTGCAGTGGAT
GCATTGGCTGCAGCTTTAGCCCACATTTCTGGTGCATCAAGCTTTGAACCACGATCTTTGATCACCTCTGATAAGGGGTT
TGTGACCATGACTCTGGAAAGCCTAGAGGAAATACAGGATGTCAGCTGTGCTTGGAAAGAACTTAACAGAAAGCTGAGTA
GTAATGCAGTGTCTCAGATTACCAGAATGTGCCTCCTGAAAGGAAATATGGGTGTTTGCTTTGATGTTCCTACAACTGAG
TCAGAAAGGTTACAGGCAGAGTGGCATGATTCCGACTGGATACTCTCAGTGCCAGCCAAATTACCTGAAATTGAAGAATA
TTATGATGGAAACACATCTTCTAATTCCAGACAGAGGAGTGGCTGGTCAAGTGGTCGATCAGGCCGGTCAGGCCGGTCAG
GTGGTCGATCTGGCGGCCGGTCAGGTAGACAGAGTCGACAAGGAAGTCGCTCAGGAAGTCGACAAGATGGTAGAAGACGA
AGTGGGAATAGAAATCGATCAAGAAGTGGGGGCCACAAACGGAGTTTTGACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 9 .93 RPM |
| bodymap2_lung | 34 .60 RPM |
| bodymap2_breast | 39 .11 RPM |
| bodymap2_adipose | 40 .03 RPM |
| bodymap2_adrenal | 49 .29 RPM |
| bodymap2_skeletal_muscle | 45 .49 RPM |
| bodymap2_thyroid | 59 .94 RPM |
| bodymap2_prostate | 74 .58 RPM |
| bodymap2_colon | 73 .42 RPM |
| bodymap2_testis | 78 .09 RPM |
| bodymap2_brain | 21 .85 RPM |
| bodymap2_heart | 23 .37 RPM |
| bodymap2_white_blood_cells | 48 .55 RPM |
| bodymap2_lymph_node | 33 .37 RPM |
| bodymap2_ovary | 79 .40 RPM |
| bodymap2_kidney | 37 .02 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000018844 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000080007 | within_species_paralog | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000001006 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000020076 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000011631 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000001844 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000002390 | ortholog_one2one | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000002562 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_2089 | 88.29 | 62.28 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_2866 | 82.08 | 64.72 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000107625 retrocopies