Parental gene:

DDX43, ENSG00000080007

Aliases:DDX43, CT13, HAGE
Description:DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 [Source:HGNC Symbol;Acc:18677]
Organism:Human (Homo sapiens)
Coordinates:6:74104470..74127292(+)


>ENSG00000080007
ATGTCCCACCACGGAGGAGCTCCCAAGGCCTCTACGTGGGTCGTTGCTAGTCGGCGAAGCTCGACAGTGTCCCGAGCGCC
AGAGAGGAGGCCGGCGGAGGAGTTGAATCGAACAGGTCCTGAGGGATATAGTGTCGGCAGAGGTGGTCGCTGGAGAGGCA
CCTCTAGGCCCCCGGAGGCCGTGGCCGCTGGTCACGAGGAACTGCCGCTGTGTTTTGCTTTGAAGAGCCACTTTGTTGGC
GCGGTAATCGGTCGTGGTGGGTCAAAAATAAAGAATATACAAAGTACAACAAACACCACAATCCAAATAATACAAGAACA
ACCAGAATCATTAGTCAAAATTTTTGGCAGCAAGGCAATGCAAACGAAAGCAAAAGCAGTGATAGACAATTTTGTTAAAA
AGCTAGAAGAAAATTACAATTCAGAATGCGGAATTGATACTGCATTCCAACCTTCTGTTGGAAAAGATGGAAGCACAGAT
AACAATGTTGTTGCAGGAGATCGGCCATTGATAGATTGGGATCAAATTAGAGAGGAAGGTTTGAAATGGCAAAAAACAAA
GTGGGCAGATTTACCACCAATTAAGAAAAACTTTTATAAAGAGTCCACTGCCACAAGTGCCATGTCAAAAGTAGAAGCAG
ATAGTTGGAGGAAAGAAAATTTTAATATAACGTGGGATGACTTGAAGGATGGGGAGAAACGACCTATCCCCAATCCTACC
TGCACATTTGATGACGCCTTTCAATGTTATCCTGAGGTTATGGAAAACATTAAAAAGGCAGGTTTTCAAAAGCCAACACC
TATTCAGTCACAGGCATGGCCCATTGTGTTGCAAGGAATAGATCTTATAGGAGTAGCCCAGACTGGAACAGGAAAGACAT
TGTGTTATTTAATGCCTGGATTTATTCATCTGGTCCTTCAACCCAGCCTTAAAGGTCAAAGGAATAGACCCGGCATGTTA
GTTCTAACTCCCACTCGGGAATTAGCACTTCAAGTAGAAGGAGAATGTTGCAAATATTCATATAAAGGGCTTCGGAGTGT
TTGTGTATATGGTGGTGGAAATAGAGATGAACAAATAGAAGAGCTTAAAAAAGGTGTAGATATCATAATTGCAACTCCCG
GAAGATTGAATGATCTGCAAATGAGTAACTTCGTCAATCTGAAGAATATAACCTACTTGGTTTTAGATGAAGCAGACAAG
ATGTTGGACATGGGATTTGAACCCCAGATAATGAAGATTTTGTTAGATGTGCGCCCAGATAGGCAGACAGTTATGACCAG
TGCTACATGGCCTCATTCAGTTCATCGCCTCGCACAATCTTATTTGAAAGAACCAATGATTGTCTATGTTGGTACATTGG
ATCTAGTTGCTGTAAGTTCAGTGAAGCAAAATATAATTGTAACCACCGAGGAAGAGAAATGGAGTCACATGCAAACTTTT
CTACAGAGTATGTCATCCACAGACAAAGTCATTGTCTTCGTTTCTCGAAAAGCTGTTGCGGATCACTTATCAAGTGACCT
AATACTTGGAAATATATCAGTAGAGTCTCTGCATGGAGATAGAGAACAGAGAGATCGGGAGAAAGCATTAGAGAACTTTA
AAACAGGCAAAGTGAGAATACTAATTGCAACTGATCTAGCCTCTAGAGGACTTGATGTCCATGACGTTACACATGTCTAT
AATTTTGACTTTCCACGGAATATTGAAGAATACGTACACCGAATAGGGCGCACGGGAAGAGCAGGGAGGACTGGTGTTTC
CATTACAACTTTGACTAGAAATGATTGGAGGGTTGCCTCTGAATTGATTAATATTCTGGAAAGAGCAAATCAGAGTATTC
CAGAGGAGCTTGTATCAATGGCTGAGAGGTTTAAGGCACATCAACAGAAAAGGGAAATGGAAAGAAAAATGGAAAGACCT
CAAGGAAGGCCCAAGAAGTTTCATTAA

Library Parental gene expression (RPM)
bodymap2_liver 0 .23 RPM
bodymap2_lung 0 .62 RPM
bodymap2_breast 1 .13 RPM
bodymap2_adipose 1 .13 RPM
bodymap2_adrenal 4 .24 RPM
bodymap2_skeletal_muscle 0 .60 RPM
bodymap2_thyroid 2 .96 RPM
bodymap2_prostate 0 .94 RPM
bodymap2_colon 0 .23 RPM
bodymap2_testis 38 .52 RPM
bodymap2_brain 0 .12 RPM
bodymap2_heart 0 .41 RPM
bodymap2_white_blood_cells 1 .22 RPM
bodymap2_lymph_node 1 .43 RPM
bodymap2_ovary 0 .23 RPM
bodymap2_kidney 0 .27 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000007851 ortholog_one2one 1 retrogene
retro_amel_31,
Callithrix jacchus ENSCJAG00000009966 ortholog_one2one 2 retrogenes
retro_cjac_3639, retro_cjac_3640,
Equus caballus ENSECAG00000017971 ortholog_one2one 1 retrogene
retro_ecab_7,
Felis catus ENSFCAG00000031631 ortholog_one2one 1 retrogene
retro_fcat_583,
Homo sapiens ENSG00000107625 within_species_paralog 2 retrogenes
retro_hsap_2089, retro_hsap_2866,
Gorilla gorilla ENSGGOG00000016092 ortholog_one2one 1 retrogene
retro_ggor_2889,
Microcebus murinus ENSMICG00000017145 ortholog_one2one 1 retrogene
retro_mmur_1603,
Monodelphis domestica ENSMODG00000018546 ortholog_many2many 1 retrogene
retro_mdom_14,
Mustela putorius furo ENSMPUG00000004342 ortholog_one2one 1 retrogene
retro_mputfur_47,
Nomascus leucogenys ENSNLEG00000001209 ortholog_one2one 1 retrogene
retro_nleu_1094,
Oryctolagus cuniculus ENSOCUG00000006338 ortholog_one2many 2 retrogenes
retro_ocun_1061, retro_ocun_227,
Otolemur garnettii ENSOGAG00000013660 ortholog_one2one 1 retrogene
retro_ogar_227,
Procavia capensis ENSPCAG00000005962 ortholog_one2one 1 retrogene
retro_pcap_151,
Pongo abelii ENSPPYG00000016774 ortholog_one2one 1 retrogene
retro_pabe_39,
Pan troglodytes ENSPTRG00000018344 ortholog_one2one 1 retrogene
retro_ptro_35,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_76 61.60 96.14
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Download FASTA sequences of all ENSG00000080007 retrocopies