Parental gene:

RAD23B, ENSG00000119318

Aliases:RAD23B, HHR23B, HR23B, P58
Description:RAD23 homolog B (S. cerevisiae) [Source:HGNC Symbol;Acc:9813]
Organism:Human (Homo sapiens)
Coordinates:9:110045417..110094475(+)


>ENSG00000119318
ATGCAGGTCACCCTGAAGACCCTCCAGCAGCAGACCTTCAAGATAGACATTGACCCCGAGGAGACGGTGAAAGCACTGAA
AGAGAAGATTGAATCTGAAAAGGGGAAAGATGCCTTTCCAGTAGCAGGTCAAAAATTAATTTATGCAGGCAAAATCCTCA
ATGATGATACTGCTCTCAAAGAATATAAAATTGATGAGAAAAACTTTGTGGTGGTTATGGTGACCAAACCCAAAGCAGTG
TCCACACCAGCACCAGCTACAACTCAGCAGTCAGCTCCTGCCAGCACTACAGCAGTTACTTCCTCCACCACCACAACTGT
GGCTCAGGCTCCAACCCCTGTCCCTGCCTTGGCCCCCACTTCCACACCTGCATCCATCACTCCAGCATCAGCGACAGCAT
CTTCTGAACCTGCACCTGCTAGTGCAGCTAAACAAGAGAAGCCTGCAGAAAAGCCAGCAGAGACACCAGTGGCTACTAGC
CCAACAGCAACTGACAGTACATCGGGTGATTCTTCTCGGTCAAACCTTTTTGAAGATGCAACGAGTGCACTTGTGACGGG
TCAGTCTTACGAGAATATGGTAACTGAGATCATGTCAATGGGCTATGAACGAGAGCAAGTAATTGCAGCCCTGAGAGCCA
GTTTCAACAACCCTGACAGAGCAGTGGAGTATCTTTTAATGGGAATCCCTGGAGATAGAGAAAGTCAGGCTGTGGTTGAC
CCCCCTCAAGCAGCTAGTACTGGGGCTCCTCAGTCTTCAGCAGTGGCTGCAGCTGCAGCAACTACGACAGCAACAACTAC
AACAACAAGTTCTGGAGGACATCCCCTTGAATTTTTACGGAATCAGCCTCAGTTTCAACAGATGAGACAAATTATTCAGC
AGAATCCTTCCTTGCTTCCAGCGTTACTACAGCAGATAGGTCGAGAGAATCCTCAATTACTTCAGCAAATTAGCCAACAC
CAGGAGCATTTTATTCAGATGTTAAATGAACCAGTTCAAGAAGCTGGTGGTCAAGGAGGAGGAGGTGGAGGTGGCAGTGG
AGGAATTGCAGAAGCTGGAAGTGGTCATATGAACTACATTCAAGTAACACCTCAGGAAAAAGAAGCTATAGAAAGGTTAA
AGGCATTAGGATTTCCTGAAGGACTTGTGATACAAGCGTATTTTGCTTGTGAGAAGAATGAGAATTTGGCTGCCAATTTT
CTTCTACAGCAGAACTTTGATGAAGATTGA

Library Parental gene expression (RPM)
bodymap2_adipose 232 .53 RPM
bodymap2_adrenal 141 .61 RPM
bodymap2_brain 185 .60 RPM
bodymap2_breast 366 .37 RPM
bodymap2_colon 249 .14 RPM
bodymap2_heart 136 .45 RPM
bodymap2_kidney 157 .87 RPM
bodymap2_liver 201 .33 RPM
bodymap2_lung 188 .40 RPM
bodymap2_lymph_node 141 .95 RPM
bodymap2_ovary 221 .53 RPM
bodymap2_prostate 211 .79 RPM
bodymap2_skeletal_muscle 310 .28 RPM
bodymap2_testis 277 .89 RPM
bodymap2_thyroid 240 .53 RPM
bodymap2_white_blood_cells 178 .02 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000001926 ortholog_one2one 1 retrogene
retro_btau_877,
Callithrix jacchus ENSCJAG00000016908 ortholog_one2many 2 retrogenes
retro_cjac_3865, retro_cjac_4184,
Equus caballus ENSECAG00000021928 ortholog_one2one 1 retrogene
retro_ecab_361,
Gorilla gorilla ENSGGOG00000002511 ortholog_one2one 1 retrogene
retro_ggor_1829,
Macaca mulatta ENSMMUG00000014944 ortholog_one2one 2 retrogenes
retro_mmul_1476, retro_mmul_1725,
Nomascus leucogenys ENSNLEG00000017319 ortholog_one2one 1 retrogene
retro_nleu_1590,
Oryctolagus cuniculus ENSOCUG00000007316 possible_ortholog 1 retrogene
retro_ocun_1429,
Otolemur garnettii ENSOGAG00000014216 ortholog_one2one 1 retrogene
retro_ogar_3040,
Pongo abelii ENSPPYG00000019477 ortholog_one2one 2 retrogenes
retro_pabe_2344, retro_pabe_3162,
Pan troglodytes ENSPTRG00000021229 ortholog_one2one 1 retrogene
retro_ptro_1760,
Sarcophilus harrisii ENSSHAG00000011925 ortholog_one2many 1 retrogene
retro_shar_248,
Sus scrofa ENSSSCG00000005436 ortholog_one2one 1 retrogene
retro_sscr_770,
Tursiops truncatus ENSTTRG00000007597 ortholog_one2one 1 retrogene
retro_ttru_1401,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_2611 85.51 100.00
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2. retro_hsap_3754 62.14 58.92
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Download FASTA sequences of all ENSG00000119318 retrocopies