Parental gene:

PSMB7, ENSG00000136930

Aliases:PSMB7, Z
Description:proteasome (prosome, macropain) subunit, beta type, 7 [Source:HGNC Symbol;Acc:9544]
Organism:Human (Homo sapiens)
Coordinates:9:127115744..127177723(-)


>ENSG00000136930
ATGGCGGCTGTGTCGGTGTATGCTCCACCAGTTGGAGGCTTCTCTTTTGATAACTGCCGCAGGAATGCCGTCTTGGAAGC
CGATTTTGCAAAGAGGGGATACAAGCTTCCAAAGGTCCGGAAAACTGGCACGACCATCGCTGGGGTGGTCTATAAGGATG
GCATAGTTCTTGGAGCAGATACAAGAGCAACTGAAGGGATGGTTGTTGCTGACAAGAACTGTTCAAAAATACACTTCATA
TCTCCTAATATTTATTGTTGTGGTGCTGGGACAGCTGCAGACACAGACATGACAACCCAGCTCATTTCTTCCAACCTGGA
GCTCCACTCCCTCTCCACTGGCCGTCTTCCCAGAGTTGTGACAGCCAATCGGATGCTGAAGCAGATGCTTTTCAGGTATC
AAGGTTACATTGGTGCAGCCCTAGTTTTAGGGGGAGTAGATGTTACTGGACCTCACCTCTACAGCATCTATCCTCATGGA
TCAACTGATAAGTTGCCTTATGTCACCATGGGTTCTGGCTCCTTGGCAGCAATGGCTGTATTTGAAGATAAGTTTAGGCC
AGACATGGAGGAGGAGGAAGCCAAGAATCTGGTGAGCGAAGCCATCGCAGCTGGCATCTTCAACGACCTGGGCTCCGGAA
GCAACATTGACCTCTGCGTCATCAGCAAGAACAAGCTGGATTTTCTCCGCCCATACACAGTGCCCAACAAGAAGGGGACC
AGGCTTGGCCGGTACAGGTGTGAGAAAGGGACTACTGCAGTCCTCACTGAGAAAATCACTCCTCTGGAGATTGAGGTGCT
GGAAGAAACAGTCCAAACAATGGACACTTCCTGA

Library Parental gene expression (RPM)
bodymap2_adipose 67 .86 RPM
bodymap2_adrenal 79 .03 RPM
bodymap2_brain 63 .76 RPM
bodymap2_breast 68 .72 RPM
bodymap2_colon 58 .66 RPM
bodymap2_heart 56 .16 RPM
bodymap2_kidney 72 .67 RPM
bodymap2_liver 84 .75 RPM
bodymap2_lung 53 .34 RPM
bodymap2_lymph_node 57 .98 RPM
bodymap2_ovary 66 .35 RPM
bodymap2_prostate 69 .26 RPM
bodymap2_skeletal_muscle 61 .62 RPM
bodymap2_testis 108 .46 RPM
bodymap2_thyroid 72 .39 RPM
bodymap2_white_blood_cells 80 .96 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000003067 ortholog_one2one 2 retrogenes
retro_btau_1722, retro_btau_983,
Echinops telfairi ENSETEG00000005432 ortholog_one2one 2 retrogenes
retro_etel_2093, retro_etel_231,
Gorilla gorilla ENSGGOG00000012164 ortholog_one2one 1 retrogene
retro_ggor_1019,
Nomascus leucogenys ENSNLEG00000017268 ortholog_one2one 1 retrogene
retro_nleu_2947,
Otolemur garnettii ENSOGAG00000003513 ortholog_one2one 1 retrogene
retro_ogar_2828,
Pongo abelii ENSPPYG00000019596 ortholog_one2one 1 retrogene
retro_pabe_1092,
Pan troglodytes ENSPTRG00000021354 ortholog_one2one 1 retrogene
retro_ptro_893,
Pteropus vampyrus ENSPVAG00000000204 ortholog_one2one 2 retrogenes
retro_pvam_1271, retro_pvam_866,
Rattus norvegicus ENSRNOG00000011732 ortholog_one2many 3 retrogenes
retro_rnor_1581, retro_rnor_1582, retro_rnor_2469,
Sorex araneus ENSSARG00000009395 ortholog_one2one 1 retrogene
retro_sara_532,
Tupaia belangeri ENSTBEG00000009196 ortholog_one2one 2 retrogenes
retro_tbel_2889, retro_tbel_751,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_1303 68.94 56.68
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Download FASTA sequences of all ENSG00000136930 retrocopies