Parental gene:

PSMB7, ENSPVAG00000000204

Aliases:None
Description:proteasome (prosome, macropain) subunit, beta type, 7 [Source:HGNC Symbol;Acc:9544]
Organism:Megabat (Pteropus vampyrus)
Coordinates:GeneScaffold_812:251485..304209(-)


>ENSPVAG00000000204
AATGCCGTCTTGGAAGCCGATTTTGCAAAGAAAGGGTACAAGCTTCCAGCAGCCCGGAAAACTGGCACAACTATTGCGGG
GGTGGTCTATAAGGATGGCATAGTTCTTGGAGCAGATACAAGGGCAACTGAAGGAATGGTTGTTGCTGACAAGAACTGTT
CAAAAATACACTTCATTTCTCCTAACATTTATTGTTGTGGTGCTGGAACAGCTGCAGACACGGATATGACAACCCAGCTC
ATTTCTTCCAACTTGGAGCTCCACTCCCTCTCCACTGGTCGCCTTCCCAGAGTCGTGACGGCCAATCGGATGCTGAAGCA
GATGCTTTTCAGGTATCAAGGTTACATTGGTGCAGCCCTAGTTTTGGGGGGCGTAGATGTTACTGGACCTCACCTCTACA
GCATCTATCCTCATGGATCAACTGATAAGTTGCCTTATGTCACCATGGGTTCTGGCTCCTTGGCAGCAATGGCTGTGTTT
GAAGATAAGTTTAGGCCAGATATGGAGGAGGAGGAAGCCAAGACGCTGGTGAGTGAAGCCATTGCAGCCGGCATTTTCAA
TGACTTGGGGTCTGGAAGTAACATTGACCTCTGTGTCATTAACAAGAGCAAGCTGGATTTCCTCCGCCCGTTCTCAGTGC
CCAACAAGAAGGGGACCAGGTTTGGCCGGTACCGGTGTGAGAAAGGGACCACTGCAGTCCTCACTGAAAAAGTCACTAGC
CTGGAAATCGAGGTGCTGGAAGAAACAGTCCAAACGATGGACACGTCCTGA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000003067 ortholog_one2one 2 retrogenes
retro_btau_1722, retro_btau_983,
Echinops telfairi ENSETEG00000005432 ortholog_one2one 2 retrogenes
retro_etel_2093, retro_etel_231,
Homo sapiens ENSG00000136930 ortholog_one2one 1 retrogene
retro_hsap_1303,
Gorilla gorilla ENSGGOG00000012164 ortholog_one2one 1 retrogene
retro_ggor_1019,
Nomascus leucogenys ENSNLEG00000017268 ortholog_one2one 1 retrogene
retro_nleu_2947,
Otolemur garnettii ENSOGAG00000003513 ortholog_one2one 1 retrogene
retro_ogar_2828,
Pongo abelii ENSPPYG00000019596 ortholog_one2one 1 retrogene
retro_pabe_1092,
Pan troglodytes ENSPTRG00000021354 ortholog_one2one 1 retrogene
retro_ptro_893,
Rattus norvegicus ENSRNOG00000011732 ortholog_one2many 3 retrogenes
retro_rnor_1581, retro_rnor_1582, retro_rnor_2469,
Sorex araneus ENSSARG00000009395 ortholog_one2one 1 retrogene
retro_sara_532,
Tupaia belangeri ENSTBEG00000009196 ortholog_one2one 2 retrogenes
retro_tbel_2889, retro_tbel_751,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pvam_866 75.17 55.86
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2. retro_pvam_1271 80.92 58.20
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Download FASTA sequences of all ENSPVAG00000000204 retrocopies