Parental gene:

PSMB7, ENSPPYG00000019596

Aliases:None
Description:proteasome (prosome, macropain) subunit, beta type, 7 [Source:HGNC Symbol;Acc:9544]
Organism:Orangutan (Pongo abelii)
Coordinates:9:121239014..121300941(-)


>ENSPPYG00000019596
ATGGCGGCTGTGTCGGTGTATGCTCCACCAGTTGGAGGCTTCTCTTTTGATAACTGCCGCAGGAATGCCGTCTTGGAAGC
CGATTTTGCAAAGAGGGGATACAAGCTTCCAAAGGCCCGCAAAACTGGCACGACCATCGCTGGGGTGGTCTATAAGGATG
GCATAGTTCTTGGAGCAGATACAAGAGCAACTGAAGGGATGGTTGTTGCTGACAAGAACTGTTCAAAAATACATTTCATA
TCTCCTAATATTTATTGTTGTGGTGCTGGGACAGCTGCAGACACAGACATGACAACCCAACTCATTTCTTCCAACTTGGA
GCTCCACTCCCTCTCCACTGGCCGTCTTCCCAGAGTTGTGACAGCCAATAGAATGCTGAAGCAGATGCTTTTCAGGTATC
AAGGTTACATTGGTGCAGCCCTAGTTTTAGGGGGAGTAGATGTTACTGGACCTCACCTCTACAGCATCTATCCTCACGGA
TCAACTGATAAGTTGCCTTATGTCACCATGGGTTCTGGCTCCTTGGCAGCAATGGCTGTATTTGAAGATAAGTTTAGGCC
AGACATGGAGGAGGAAGAAGCCAAGAAGCTGGTGAGCGAAGCCATCGCAGCTGGCATCTTCAACGACCTGGGCTCCGGAA
GCAACATTGACCTCTGTGTCATCAGCAAGAACAAGCTGGATTTTCTCCGCCCATACACAGTGCCCAACAAGAAGGGGACC
AGGCTTGGCCGGTACAGGTGTGAGAAAGGGACTACTGCAGTCCTCACTGAGAAAATCACTCCTCTGGAGATTGAGGTGCT
GGAAGAAACAGTCCAAACAATGGACACTTCCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 69 .50 RPM
SRP007412_cerebellum 53 .02 RPM
SRP007412_heart 42 .51 RPM
SRP007412_kidney 56 .88 RPM
SRP007412_liver 49 .21 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000003067 ortholog_one2one 2 retrogenes
retro_btau_1722, retro_btau_983,
Echinops telfairi ENSETEG00000005432 ortholog_one2one 2 retrogenes
retro_etel_2093, retro_etel_231,
Homo sapiens ENSG00000136930 ortholog_one2one 1 retrogene
retro_hsap_1303,
Gorilla gorilla ENSGGOG00000012164 ortholog_one2one 1 retrogene
retro_ggor_1019,
Nomascus leucogenys ENSNLEG00000017268 ortholog_one2one 1 retrogene
retro_nleu_2947,
Otolemur garnettii ENSOGAG00000003513 ortholog_one2one 1 retrogene
retro_ogar_2828,
Pan troglodytes ENSPTRG00000021354 ortholog_one2one 1 retrogene
retro_ptro_893,
Pteropus vampyrus ENSPVAG00000000204 ortholog_one2one 2 retrogenes
retro_pvam_1271, retro_pvam_866,
Rattus norvegicus ENSRNOG00000011732 ortholog_one2many 3 retrogenes
retro_rnor_1581, retro_rnor_1582, retro_rnor_2469,
Sorex araneus ENSSARG00000009395 ortholog_one2one 1 retrogene
retro_sara_532,
Tupaia belangeri ENSTBEG00000009196 ortholog_one2one 2 retrogenes
retro_tbel_2889, retro_tbel_751,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_1092 68.94 56.68
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Download FASTA sequences of all ENSPPYG00000019596 retrocopies