Parental gene:

ATG3, ENSG00000144848

Aliases:ATG3, APG3, APG3-LIKE, APG3L, PC3-96
Description:autophagy related 3 [Source:HGNC Symbol;Acc:20962]
Organism:Human (Homo sapiens)
Coordinates:3:112251355..112280893(-)


>ENSG00000144848
ATGCAGAATGTGATTAATACTGTGAAGGGAAAGGCACTGGAAGTGGCTGAGTACCTGACCCCGGTCCTCAAGGAATCAAA
GTTTAAGGAAACAGGTGTAATTACCCCAGAAGAGTTTGTGGCAGCTGGAGATCACCTAGTCCACCACTGTCCAACATGGC
AATGGGCTACAGGGGAAGAATTGAAAGTGAAGGCATACCTACCAACAGGCAAACAATTTTTGGTAACCAAAAATGTGCCG
TGCTATAAGCGGTGCAAACAGATGGAATATTCAGATGAATTGGAAGCTATCATTGAAGAAGATGATGGTGATGGCGGATG
GGTAGATACATATCACAACACAGGTATTACAGGAATAACGGAAGCCGTTAAAGAGATCACACTGGAAAATAAGGACAATA
TAAGGCTTCAAGATTGCTCAGCACTATGTGAAGAGGAAGAAGATGAAGATGAAGGAGAAGCTGCAGATATGGAAGAATAT
GAAGAGAGTGGATTGTTGGAAACAGATGAGGCTACCCTAGATACAAGGAAAATAGTAGAAGCTTGTAAAGCCAAAACTGA
TGCTGGCGGTGAAGATGCTATTTTGCAAACCAGAACTTATGACCTTTACATCACTTATGATAAATATTACCAGACTCCAC
GATTATGGTTGTTTGGCTATGATGAGCAACGGCAGCCTTTAACAGTTGAGCACATGTATGAAGACATCAGTCAGGATCAT
GTGAAGAAAACAGTGACCATTGAAAATCACCCTCATCTGCCACCACCTCCCATGTGTTCAGTTCACCCATGCAGGCATGC
TGAGGTGATGAAGAAAATCATTGAGACTGTTGCAGAAGGAGGGGGAGAACTTGGAGTTCATATGTATCTTCTTATTTTCT
TGAAATTTGTACAAGCTGTCATTCCAACAATAGAATATGACTACACAAGACACTTCACAATGTAA

Library Parental gene expression (RPM)
bodymap2_adipose 53 .03 RPM
bodymap2_adrenal 60 .71 RPM
bodymap2_brain 62 .63 RPM
bodymap2_breast 53 .85 RPM
bodymap2_colon 47 .31 RPM
bodymap2_heart 24 .05 RPM
bodymap2_kidney 56 .29 RPM
bodymap2_liver 30 .59 RPM
bodymap2_lung 48 .24 RPM
bodymap2_lymph_node 42 .43 RPM
bodymap2_ovary 69 .47 RPM
bodymap2_prostate 39 .25 RPM
bodymap2_skeletal_muscle 17 .55 RPM
bodymap2_testis 130 .61 RPM
bodymap2_thyroid 84 .53 RPM
bodymap2_white_blood_cells 114 .74 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000018116 ortholog_one2many 1 retrogene
retro_amel_645,
Callithrix jacchus ENSCJAG00000020358 ortholog_one2one 1 retrogene
retro_cjac_2756,
Equus caballus ENSECAG00000011954 ortholog_one2one 1 retrogene
retro_ecab_594,
Gorilla gorilla ENSGGOG00000006637 ortholog_one2one 1 retrogene
retro_ggor_1544,
Myotis lucifugus ENSMLUG00000001573 ortholog_one2one 1 retrogene
retro_mluc_1025,
Macaca mulatta ENSMMUG00000014232 ortholog_one2one 1 retrogene
retro_mmul_594,
Mustela putorius furo ENSMPUG00000000321 ortholog_one2many 2 retrogenes
retro_mputfur_1064, retro_mputfur_1614,
Nomascus leucogenys ENSNLEG00000004302 ortholog_one2one 2 retrogenes
retro_nleu_268, retro_nleu_331,
Oryctolagus cuniculus ENSOCUG00000015651 ortholog_one2many 1 retrogene
retro_ocun_1219,
Pongo abelii ENSPPYG00000013548 ortholog_one2one 1 retrogene
retro_pabe_1827,
Pan troglodytes ENSPTRG00000015220 ortholog_one2one 1 retrogene
retro_ptro_1434,
Pteropus vampyrus ENSPVAG00000009568 ortholog_one2one 1 retrogene
retro_pvam_1399,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_2479 66.93 81.99
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSG00000144848 retrocopies