Parental gene:

MMU.403, ENSMMUG00000014232

Aliases:None
Description:autophagy-related protein 3 [Source:RefSeq peptide;Acc:NP_001181205]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:2:32629117..32657872(-)


>ENSMMUG00000014232
ATGCAGAATGTAATTAATACGGTGAAGGGAAAGGCACTGGAAGTGGCTGAGTACCTGACCCCGGTCCTCAAGGAATCAAA
GTTTAAGGAAACAGGTGTAATTACCCCAGAAGAGTTTGTGGCAGCTGGAGATCACTTAGTCCACCACTGTCCAACCTGGC
AATGGGCTACAGGGGAAGAATTGAAAGTGAAGGCATACCTACCAGCAGGCAAACAATTTCTGGTAACCAAAAATGTGCCG
TGCTATAAGCGGTGCAAACAGATGGAATATTCAGATGAATTGGAAGCTATCATTGAAGAAGATGATGGTGATGGCGGATG
GGTAGATACATATCACAACACAGGTATTACAGGAATAACTGAAGCAGTTAAAGAGATCACATTGGAAAACAAGGACAATA
TAAGACTTCAAGATTGCTCAGCACTATGTGAAGAGGAAGAAGAGGAAGATGAAGGAGAAGCTGCAGATATGGAAGAATAT
GAAGAGAGTGGATTGTTGGAAACAGATGAGGCTACCCTAGATACAAGCAAAATAGTAGAAGCTTGTAAAGCCAAAACTGA
TGCTGGCGGTGAAGATGCTATTTTGCAAACCAGAACTTACGACCTTTACATCACTTATGATAAATATTACCAGACTCCAC
GATTATGGTTGTTTGGCTATGATGAGCAACGGCAGCCTTTAACAGTTGAGCACATGTATGAAGACATCAGTCAAGATCAT
GTGAAGAAAACAGTGACCATTGAAAATCACCCTCATCTGCCACCACCTCCTATGTGTTCAGTTCACCCATGCAGGCATGC
TGAGGTGATGAAGAAAATCATTGAGACTGTTGCAGAAGGAGGGGGAGAACTTGGAGTTCATATGTATCTTCTTATTTTCT
TGAAATTTGTACAAGCTGTCATTCCAACAATAGAATATGACTACACAAGGCATTTCACAATGTAG

Library Parental gene expression (RPM)
SRP007412_brain 26 .11 RPM
SRP007412_brain_prefrontal_cortex 20 .15 RPM
SRP007412_cerebellum 24 .02 RPM
SRP007412_heart 19 .43 RPM
SRP007412_kidney 29 .11 RPM
SRP007412_liver 28 .74 RPM
SRP007412_testis 78 .36 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000018116 ortholog_one2many 1 retrogene
retro_amel_645,
Callithrix jacchus ENSCJAG00000020358 ortholog_one2one 1 retrogene
retro_cjac_2756,
Equus caballus ENSECAG00000011954 ortholog_one2one 1 retrogene
retro_ecab_594,
Homo sapiens ENSG00000144848 ortholog_one2one 1 retrogene
retro_hsap_2479,
Gorilla gorilla ENSGGOG00000006637 ortholog_one2one 1 retrogene
retro_ggor_1544,
Myotis lucifugus ENSMLUG00000001573 ortholog_one2one 1 retrogene
retro_mluc_1025,
Mustela putorius furo ENSMPUG00000000321 ortholog_one2many 2 retrogenes
retro_mputfur_1064, retro_mputfur_1614,
Nomascus leucogenys ENSNLEG00000004302 ortholog_one2one 2 retrogenes
retro_nleu_268, retro_nleu_331,
Oryctolagus cuniculus ENSOCUG00000015651 ortholog_one2many 1 retrogene
retro_ocun_1219,
Pongo abelii ENSPPYG00000013548 ortholog_one2one 1 retrogene
retro_pabe_1827,
Pan troglodytes ENSPTRG00000015220 ortholog_one2one 1 retrogene
retro_ptro_1434,
Pteropus vampyrus ENSPVAG00000009568 ortholog_one2one 1 retrogene
retro_pvam_1399,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_594 62.85 79.62
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Download FASTA sequences of all ENSMMUG00000014232 retrocopies