Parental gene:

APIP, ENSG00000149089

Aliases:APIP, APIP2, CGI29, MMRP19, hAPIP
Description:APAF1 interacting protein [Source:HGNC Symbol;Acc:17581]
Organism:Human (Homo sapiens)
Coordinates:11:34874640..34938046(-)


>ENSG00000149089
ATGTCTGGCTGTGATGCTCGGGAGGGAGACTGTTGTTCCCGGAGATGCGGCGCGCAGGACAAGGAGCATCCAAGATACCT
GATCCCAGAACTTTGCAAACAGTTTTACCATTTAGGCTGGGTCACTGGGACTGGAGGAGGAATTAGCTTGAAGCATGGCG
ATGAAATCTACATTGCTCCTTCAGGAGTGCAAAAGGAACGAATTCAGCCTGAAGACATGTTTGTTTGTGATATAAATGAA
AAGGACATAAGTGGACCTTCGCCATCGAAGAAGCTAAAAAAAAGCCAGTGTACTCCTCTTTTCATGAATGCTTACACAAT
GAGAGGAGCAGGTGCAGTGATTCATACCCACTCTAAAGCTGCTGTGATGGCCACACTTCTCTTTCCAGGACGGGAGTTTA
AAATTACACATCAAGAGATGATAAAAGGAATAAAGAAATGTACTTCCGGAGGGTATTATAGATATGATGATATGTTAGTG
GTACCCATTATTGAGAATACACCTGAGGAGAAAGACCTCAAAGATAGAATGGCTCATGCAATGAATGAATACCCAGACTC
CTGTGCAGTACTGGTCAGACGTCATGGAGTATATGTGTGGGGGGAAACATGGGAGAAGGCCAAAACCATGTGTGAGTGTT
ATGACTATTTATTTGATATTGCCGTATCAATGAAGAAAGTAGGACTTGATCCTTCACAGCTCCCAGTTGGAGAAAATGGA
ATTGTCTAA

Library Parental gene expression (RPM)
bodymap2_liver 13 .43 RPM
bodymap2_lung 18 .41 RPM
bodymap2_breast 32 .51 RPM
bodymap2_adipose 19 .10 RPM
bodymap2_adrenal 20 .61 RPM
bodymap2_skeletal_muscle 19 .01 RPM
bodymap2_thyroid 29 .55 RPM
bodymap2_prostate 26 .92 RPM
bodymap2_colon 22 .72 RPM
bodymap2_testis 18 .51 RPM
bodymap2_brain 18 .89 RPM
bodymap2_heart 13 .27 RPM
bodymap2_white_blood_cells 15 .45 RPM
bodymap2_lymph_node 21 .71 RPM
bodymap2_ovary 18 .02 RPM
bodymap2_kidney 30 .48 RPM



Species Parental gene accession Homology type Retrogenes number
Echinops telfairi ENSETEG00000016758 ortholog_one2one 1 retrogene
retro_etel_220,
Gorilla gorilla ENSGGOG00000022940 ortholog_one2one 2 retrogenes
retro_ggor_2818, retro_ggor_2873,
Ornithorhynchus anatinus ENSOANG00000007394 ortholog_one2many 6 retrogenes
retro_oana_108, retro_oana_109, retro_oana_121, retro_oana_63, retro_oana_85, retro_oana_96,
Pongo abelii ENSPPYG00000003361 ortholog_one2one 1 retrogene
retro_pabe_3442,
Pan troglodytes ENSPTRG00000003499 ortholog_one2one 1 retrogene
retro_ptro_2856,
Sarcophilus harrisii ENSSHAG00000011523 ortholog_one2one 1 retrogene
retro_shar_574,
Ictidomys tridecemlineatus ENSSTOG00000004390 ortholog_one2one 1 retrogene
retro_itri_1029,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_4208 95.04 100.00
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Download FASTA sequences of all ENSG00000149089 retrocopies