Parental gene:

APIP, ENSPPYG00000003361

Aliases:None
Description:APAF1 interacting protein [Source:HGNC Symbol;Acc:17581]
Organism:Orangutan (Pongo abelii)
Coordinates:11:34391131..34425167(+)


>ENSPPYG00000003361
ATGTCTGGCTGTGACGCTCGGGAGGGAGACTGTTGTTCCTGGAGATGCGGCGCGCAGGACAAGGAGCATCCAAGATACCT
GATCCCAGAACTTTGCAAACAGTTTTACCATTTGGGCTGGGTCAGTGGGACTGGAGGAGGAATTAGTTTGAAGCATGGCG
ATGAAATCTACATTGCTCCTTCAGGAGTGCAAAAGGAACGAATTCAGCCTGAAGACATGTTTGTTTGTGATATAAATGAA
AAGGACATAAGTGGACCTTCGCCATCTAAGAAGCTAAAAAAAAGCCAGTGTACTCCTCTTTTCATGAATGCTTACACAAT
GAGAGGAGCAGGTGCAGTGATTCATACCCACTCTAAAGCTGCTGTGATGGCCACCCTTCTGTTTCCAGGACGGGAGTTTA
AAATTACGCATCAAGAGATGATAAAAGGAATAAAGAAATGTACTTCCGGAGGGTATTACAGATATGATGATATGTTAGTG
GTACCCATTATTGAGAATACACCTGAGGAGAAAGACCTCAAAGATAGAATGGCTCATGCAATGAATGAATACCCAGACTC
CTGTGCAGTATTGGTCAGACGTCATGGAGTATATGTGTGGGGGGAAACATGGGAGAAGGCCAAAACCATGTGTGAGTGTT
ATGACTATTTATTTGATATTGCCGTATCAATGAAGAAAGTAGGACTTGATCCTTCACAGCTCCCAGTTGGAGAAAATGGA
ATTGTCTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 5 .31 RPM
SRP007412_cerebellum 6 .08 RPM
SRP007412_heart 4 .97 RPM
SRP007412_kidney 13 .09 RPM
SRP007412_liver 8 .97 RPM



Species Parental gene accession Homology type Retrogenes number
Echinops telfairi ENSETEG00000016758 ortholog_one2one 1 retrogene
retro_etel_220,
Homo sapiens ENSG00000149089 ortholog_one2one 1 retrogene
retro_hsap_4208,
Gorilla gorilla ENSGGOG00000022940 ortholog_one2one 2 retrogenes
retro_ggor_2818, retro_ggor_2873,
Ornithorhynchus anatinus ENSOANG00000007394 ortholog_one2many 6 retrogenes
retro_oana_108, retro_oana_109, retro_oana_121, retro_oana_63, retro_oana_85, retro_oana_96,
Pan troglodytes ENSPTRG00000003499 ortholog_one2one 1 retrogene
retro_ptro_2856,
Sarcophilus harrisii ENSSHAG00000011523 ortholog_one2one 1 retrogene
retro_shar_574,
Ictidomys tridecemlineatus ENSSTOG00000004390 ortholog_one2one 1 retrogene
retro_itri_1029,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_3442 92.56 100.00
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Download FASTA sequences of all ENSPPYG00000003361 retrocopies