Parental gene:

CRLF3, ENSG00000176390

Aliases:CRLF3, CREME-9, CREME9, CRLM9, CYTOR4, FRWS, p48.2
Description:cytokine receptor-like factor 3 [Source:HGNC Symbol;Acc:17177]
Organism:Human (Homo sapiens)
Coordinates:17:29096405..29151794(-)


>ENSG00000176390
ATGAGGGGGGCGATGGAGCTGGAGCCTGAGCTGCTGTTGCAGGAGGCCCGCGAGAACGTGGAGGCAGCGCAGAGCTACCG
GCGGGAGCTGGGTCACCGGCTTGAGGGGCTGCGTGAGGCGCGGAGGCAGATCAAAGAAAGTGCATCACAGACAAGGGATG
TTCTCAAACAGCATTTTAATGATTTAAAGGGAACCCTTGGAAAGCTCCTGGATGAGCGATTGGTGACCCTTTTGCAAGAG
GTGGACACCATTGAACAGGAGACCATTAAACCACTAGATGACTGCCAGAAGCTCATAGAACACGGAGTCAACACTGCAGA
GGACTTAGTCCGAGAAGGTGAAATCGCCATGCTTGGTGGTGTGGGAGAAGAGAATGAGAAACTGTGGAGCTTTACCAAAA
AGGCCTCGCACATTCAGTTGGACAGCTTACCAGAAGTACCTTTACTGGTTGATGTGCCTTGTTTATCTGCTCAGTTGGAT
GACTCAATTCTTAACATAGTGAAAGACCACATTTTTAAGCATGGAACAGTAGCATCTCGCCCACCAGTACAGATAGAAGA
ACTAATAGAGAAACCTGGAGGCATCATTGTACGATGGTGTAAGGTGGATGATGACTTTACAGCCCAAGATTACAGGCTCC
AGTTTCGTAAATGTACTTCAAATCATTTTGAGGATGTATATGTAGGTTCTGAAACTGAATTCATAGTATTGCACATAGAC
CCCAACGTTGATTACCAGTTCAGAGTCTGCGCCCGAGGAGATGGCCGACAGGAGTGGAGTCCTTGGAGTGTCCCCCAGAT
AGGTCATTCCACATTGGTGCCTCATGAGTGGACAGCTGGTTTTGAGGGGTACAGTCTGAGCAGTCGAAGAAATATAGCAC
TTCGGAACGATTCTGAATCATCGGGTGTTCTCTACTCCAGAGCTCCGACTTATTTCTGTGGGCAGACATTAACATTCAGA
GTTGAAACTGTGGGACAGCCAGACAGAAGAGATAGCATAGGAGTGTGTGCAGAAAAACAGGATGGATATGACTCTCTGCA
GCGGGATCAAGCTGTGTGCATTAGTACAAATGGTGCAGTTTTTGTCAATGGAAAAGAAATGACAAATCAGTTACCCGCAG
TTACTTCTGGGTCCACTGTCACGTTTGACATTGAAGCCGTGACTCTAGGAACCACCAGTAATAATGAAGGTGGACACTTC
AAGCTTCGAGTAACTATAAGTTCAAATAATAGAGAAGTGGTTTTTGACTGGTTACTTGATCAGTCTTGTGGTTCTCTTTA
CTTTGGATGCTCATTTTTCTATCCTGGATGGAAAGTGTTAGTGTTTTAG

Library Parental gene expression (RPM)
bodymap2_adipose 17 .63 RPM
bodymap2_adrenal 44 .73 RPM
bodymap2_brain 11 .98 RPM
bodymap2_breast 13 .97 RPM
bodymap2_colon 13 .05 RPM
bodymap2_heart 7 .00 RPM
bodymap2_kidney 14 .46 RPM
bodymap2_liver 5 .68 RPM
bodymap2_lung 18 .86 RPM
bodymap2_lymph_node 58 .13 RPM
bodymap2_ovary 23 .04 RPM
bodymap2_prostate 16 .82 RPM
bodymap2_skeletal_muscle 4 .91 RPM
bodymap2_testis 33 .82 RPM
bodymap2_thyroid 9 .08 RPM
bodymap2_white_blood_cells 185 .42 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000014163 ortholog_one2one 1 retrogene
retro_cjac_1183,
Gorilla gorilla ENSGGOG00000005002 ortholog_one2one 3 retrogenes
retro_ggor_1644, retro_ggor_1649, retro_ggor_2278,
Macaca mulatta ENSMMUG00000009069 ortholog_one2many 2 retrogenes
retro_mmul_1002, retro_mmul_998,
Mus musculus ENSMUSG00000017561 ortholog_one2one 1 retrogene
retro_mmus_368,
Nomascus leucogenys ENSNLEG00000005850 ortholog_one2one 4 retrogenes
retro_nleu_1957, retro_nleu_2534, retro_nleu_2899, retro_nleu_2900,
Pongo abelii ENSPPYG00000008142 ortholog_one2one 3 retrogenes
retro_pabe_1925, retro_pabe_1984, retro_pabe_2672,
Pan troglodytes ENSPTRG00000008963 ortholog_one2one 2 retrogenes
retro_ptro_1560, retro_ptro_2175,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_2121 64.47 50.90
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2. retro_hsap_2133 81.63 66.52
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3. retro_hsap_3360 79.41 91.86
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Download FASTA sequences of all ENSG00000176390 retrocopies