Parental gene:

Crlf3, ENSMUSG00000017561

Aliases:Crlf3, BB164954, Creme9, Cytor4
Description:cytokine receptor-like factor 3 [Source:MGI Symbol;Acc:MGI:1860086]
Organism:Mouse (Mus musculus)
Coordinates:11:80046492..80080991(-)


>ENSMUSG00000017561
ATGAAGGGCGCGATGGAGCCGGAGCCCGAGGTGCTGCTTCAGGAAGCCCGCGAGAACGTGGAGGCGGCGCAGAGCTACCG
GCGGGAGCTGGGCCAGCGGCTGCAGGGGCTGCGGGAGGCGCAGAGGCAGATAAAGGAGAGTGCTTCACAGACAAGAGATG
TCCTCAAACAGCATTTTAGTGATTTAAAAGGAACCCTTGGGAAGCTATTGGATGAGCGATTGGTGACCCTTTTGCAAGAG
GTGGACACCATTGAACAGGAGACCATCAAACCACTAGATGACTGCCAGAAACTCATAGAGCATGGGGTCAACACTGCAGA
TGACCTGGTCCGAGAAGGTGAGATTGCCATTCTTGGTGGTATCGAAGAAGAGAGTGATAAACTGTGGAACTTTACCAAAA
AGGCCTCACACATTCAGCTGGACAGCTTACCAGAAGTGCCCTTGCTAGTTGATGTACCCTGTTTGTCGGCTCAGTTGGAC
GATTCCATTCTTAACATAGTGAAAGACCACATTTTTAAGCATGGAACAGTAGCTTCCCGCCCACCAGTACAGATTGAAGA
ATTAATAGAGAAACCTGGAGGCATCATAGTGCGATGGTGTAAGGTGGATGATGACTTCACAGCCCAAGATTACAGGCTTC
AGTTCCGCAAATGTACTGCAAATCATTTTGAAGACGTGTATGTAGGTTCTGAAACGGAGTTCATAGTGTTGCACATAGAC
CCCAATGTAGATTATCAATTCAGAGTCTGCGCCCGAGGAGACGGCAGGCAGGAATGGAGTCCTTGGAGTGTTCCCCAGAC
AGGCCACTCCACACTGGTGCCTCATGAGTGGACAACTGGCTTTGAGGGATACAGTCTGAGCAGTCGAAGAAATATAGCCC
TCCGGAATGATGCCGAGTCCTCGGGTGTTCTCTACTCCAGCGCTCCAACCTACTTCTGTGGGCAGACGCTGACATTCAGA
GTTGAAACTGTGGGACAGCCAGACCGAAGAGACAGTATAGGAGTATGTGCAGAAAGGCAGAATGGCTACGAATCTCTGCA
GCGGGACCAAGCCGTGTGCATCAGCACGAATGGTGCAGTCTTTGTCAATGGAAAAGAAATGACCAATCAGTTGCCTGCAG
TTACCTCTGGCTCCACTGTCACATTTGATATCGAAGCTGTGACTCTAGGAACTTCTAACAGCCATGAAGGTGGGAACGCC
AAGCTCCGAGTGACCATCAGCTCCAATAACCGGGAGGTGGTGTTTGACTGGCTGCTCGAGCAGGCCTGTGGCCCTCTTTA
CTTCGGATGCTCGTTTTTCTACCCTGGATGGAAAGTGCTGGTATTTTAG

Library Parental gene expression (RPM)
SRP007412_brain 12 .43 RPM
SRP007412_cerebellum 20 .23 RPM
SRP007412_heart 11 .67 RPM
SRP007412_kidney 13 .01 RPM
SRP007412_liver 10 .57 RPM
SRP007412_testis 7 .23 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000014163 ortholog_one2one 1 retrogene
retro_cjac_1183,
Homo sapiens ENSG00000176390 ortholog_one2one 3 retrogenes
retro_hsap_2121, retro_hsap_2133, retro_hsap_3360,
Gorilla gorilla ENSGGOG00000005002 ortholog_one2one 3 retrogenes
retro_ggor_1644, retro_ggor_1649, retro_ggor_2278,
Macaca mulatta ENSMMUG00000009069 ortholog_one2many 2 retrogenes
retro_mmul_1002, retro_mmul_998,
Nomascus leucogenys ENSNLEG00000005850 ortholog_one2one 4 retrogenes
retro_nleu_1957, retro_nleu_2534, retro_nleu_2899, retro_nleu_2900,
Pongo abelii ENSPPYG00000008142 ortholog_one2one 3 retrogenes
retro_pabe_1925, retro_pabe_1984, retro_pabe_2672,
Pan troglodytes ENSPTRG00000008963 ortholog_one2one 2 retrogenes
retro_ptro_1560, retro_ptro_2175,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_368 89.03 53.62
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Download FASTA sequences of all ENSMUSG00000017561 retrocopies