Parental gene:

CNOT7, ENSG00000198791

Aliases:CNOT7, CAF1, Caf1a, hCAF-1
Description:CCR4-NOT transcription complex, subunit 7 [Source:HGNC Symbol;Acc:14101]
Organism:Human (Homo sapiens)
Coordinates:8:17086736..17104387(-)


>ENSG00000198791
ATGCCAGCGGCAACTGTAGATCATAGCCAAAGAATTTGTGAAGTTTGGGCTTGCAACTTGGATGAAGAGATGAAGAAAAT
TCGTCAAGTTATCCGAAAATATAATTACGTTGCTATGGACACCGAGTTTCCAGGTGTGGTTGCAAGACCCATTGGAGAAT
TCAGGAGCAATGCTGACTATCAATACCAACTATTGCGGTGTAATGTAGACTTGTTAAAGATAATTCAGCTAGGACTGACA
TTTATGAATGAGCAAGGAGAATACCCTCCAGGAACTTCAACTTGGCAGTTTAATTTTAAATTTAATTTGACGGAGGACAT
GTATGCCCAGGACTCTATAGAGCTACTAACAACATCTGGTATCCAGTTTAAAAAACATGAGGAGGAAGGAATTGAAACCC
AGTACTTTGCAGAACTTCTTATGACTTCTGGAGTGGTCCTCTGTGAAGGGGTCAAATGGTTGTCATTTCATAGCGGTTAC
GACTTTGGCTACTTAATCAAAATCCTAACCAACTCTAACTTGCCTGAAGAAGAACTTGACTTCTTTGAGATCCTTCGATT
GTTTTTTCCTGTCATTTATGATGTGAAGTACCTCATGAAGAGCTGCAAAAATCTCAAAGGTGGATTACAGGAGGTGGCAG
AACAGTTAGAGCTGGAACGGATAGGACCACAACATCAGGCAGGATCTGATTCATTGCTCACAGGAATGGCCTTTTTCAAA
ATGAGAGAAATGTTCTTTGAAGATCATATTGATGATGCCAAATATTGTGGTCATTTGTATGGCCTTGGTTCTGGTTCATC
CTATGTACAGAATGGCACAGGGAATGCATATGAAGAGGAAGCCAACAAGCAGTCATGA

Library Parental gene expression (RPM)
bodymap2_adipose 54 .33 RPM
bodymap2_adrenal 74 .59 RPM
bodymap2_brain 80 .89 RPM
bodymap2_breast 77 .20 RPM
bodymap2_colon 77 .65 RPM
bodymap2_heart 51 .75 RPM
bodymap2_kidney 85 .24 RPM
bodymap2_liver 35 .07 RPM
bodymap2_lung 59 .95 RPM
bodymap2_lymph_node 73 .79 RPM
bodymap2_ovary 103 .21 RPM
bodymap2_prostate 80 .28 RPM
bodymap2_skeletal_muscle 80 .70 RPM
bodymap2_testis 110 .78 RPM
bodymap2_thyroid 117 .79 RPM
bodymap2_white_blood_cells 136 .06 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000000677 ortholog_one2one 4 retrogenes
retro_chof_1431, retro_chof_1581, retro_chof_822, retro_chof_963,
Callithrix jacchus ENSCJAG00000011795 possible_ortholog 1 retrogene
retro_cjac_720,
Felis catus ENSFCAG00000000591 ortholog_one2one 1 retrogene
retro_fcat_1889,
Macaca mulatta ENSMMUG00000001873 ortholog_one2one 1 retrogene
retro_mmul_2592,
Mustela putorius furo ENSMPUG00000017972 ortholog_one2one 1 retrogene
retro_mputfur_1596,
Nomascus leucogenys ENSNLEG00000002489 ortholog_one2one 2 retrogenes
retro_nleu_1860, retro_nleu_2373,
Oryctolagus cuniculus ENSOCUG00000014589 ortholog_one2many 1 retrogene
retro_ocun_118,
Otolemur garnettii ENSOGAG00000006324 ortholog_one2one 2 retrogenes
retro_ogar_1883, retro_ogar_505,
Pongo abelii ENSPPYG00000018385 ortholog_one2one 2 retrogenes
retro_pabe_3771, retro_pabe_428,
Sarcophilus harrisii ENSSHAG00000011828 possible_ortholog 2 retrogenes
retro_shar_103, retro_shar_631,
Ictidomys tridecemlineatus ENSSTOG00000009175 ortholog_one2one 2 retrogenes
retro_itri_1729, retro_itri_1730,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_211 89.11 70.88
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_hsap_4851 92.98 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSG00000198791 retrocopies