Parental gene:

HSD17B12, ENSGGOG00000002003

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:11:44418993..44595082(+)


>ENSGGOG00000002003
ATGGAGAGCGCTCTCCCCGCCGCCGGCTTCCTGTACTGGGTCGGCGCGGGCACCGTGGCCTACCTAGCCCTGCGTATTTC
GTACTCGCTCTTCACGGCCCTCCGGGTCTGGGGAGTGGGAAATGAGGCGGGGGTCGGCCCGGGGCTCGGAGAATGGGCAG
TTGTCACAGGTAGTACTGATGGAATTGGAAAATCATATGCAGAAGAGTTAGCAAAGCATGGAATGAAGGTTGTCCTTATC
AGCAGATCAAAGGATAAACTTGACCAGGTTTCCAGTGAAATAAAAGAAAAATTCAAAGTGGAGACAAGAACCATTGCTGT
TGACTTTGCATCAGAAGATATTTATGATAAAATTAAAACAGGCTTGGCTGGTCTTGAAATCGGCATCTTAGTGAACAACG
TGGGAATGTCGTATGAGTATCCTGAATACTTTTTGGATGTTCCTGACTTGGACAATGTGATCAAGAAAATGATAAATATT
AATATTCTTTCTGTTTGTAAGATGACACAATTGGTACTGCCTGGCATGGTGGAAAGATCCAAAGGGGCTATTCTGAACAT
TTCATCTGGCAGTGGCATGCTCCCTGTCCCACTGTTGACCATCTATTCTGCAACCAAGACTTTTGTAGATTTCTTCTCTC
GGTGCCTCCATGAGGAGTATAGGAGCAAGGGCGTCTTTGTGCAGAGTGTCCTGCCATACTTCGTAGCTACAAAACTGGCT
AAAATCCGGAAGCCAACTTTGGATAAGCCCTCTCCGGAGATGTTTGTGAAGTCTGCAATTAAAACAGTCGGCCTGCAATC
CCGAACCAATGGATACCTGATCCATGCTCTTATGGGCTCGATAATCTCAAACCTGCCTTCTTGGATTTATTTGAAAATAG
TCATGAATATGAACAAGTCTACACGGGCTCACTATCTGAAGAAAACCAAGAAGAACTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 36 .45 RPM
SRP007412_cerebellum 24 .90 RPM
SRP007412_heart 6 .44 RPM
SRP007412_kidney 61 .54 RPM
SRP007412_liver 66 .84 RPM
SRP007412_testis 41 .54 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000011325 ortholog_one2many 1 retrogene
retro_cjac_2489,
Dipodomys ordii ENSDORG00000004834 ortholog_one2one 1 retrogene
retro_dord_561,
Homo sapiens ENSG00000149084 ortholog_one2one 1 retrogene
retro_hsap_3684,
Nomascus leucogenys ENSNLEG00000017959 ortholog_one2one 1 retrogene
retro_nleu_2273,
Oryctolagus cuniculus ENSOCUG00000016351 ortholog_one2one 1 retrogene
retro_ocun_1335,
Otolemur garnettii ENSOGAG00000009102 ortholog_one2one 1 retrogene
retro_ogar_3391,
Pongo abelii ENSPPYG00000003343 ortholog_one2one 1 retrogene
retro_pabe_3021,
Pan troglodytes ENSPTRG00000003522 ortholog_one2one 1 retrogene
retro_ptro_2499,
Ictidomys tridecemlineatus ENSSTOG00000005473 ortholog_one2one 1 retrogene
retro_itri_1099,
Tursiops truncatus ENSTTRG00000005103 ortholog_one2one 1 retrogene
retro_ttru_772,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_2491 81.54 82.37
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Download FASTA sequences of all ENSGGOG00000002003 retrocopies