Parental gene:

HSD17B12, ENSPPYG00000003343

Aliases:None
Description:hydroxysteroid (17-beta) dehydrogenase 12 [Source:HGNC Symbol;Acc:18646]
Organism:Orangutan (Pongo abelii)
Coordinates:11:24898379..25070277(-)


>ENSPPYG00000003343
ATGGAGAGCGCTCTCCCCGCCGCCGGCTTCCTGTACTGGGTCGGCGCGGGCACCGTGGCCTACCTAGCCCTGCGTATTTC
GTACTCGCTCTTCACGGCCCTCCGGGTCTGGGGAATGGGGAATGAGGCGGGGGTCGGCCCGGGGCTCGGAGAATGGGCAG
TTGTGACAGGTAGTACTGATGGAATTGGAAAATCATACGCAGAAGAGTTAGCAAAGCATGGAATGAAGGTTGTCCTTATC
AGCAGATCACAGGATAAACTTGACCAGGTTTCCAGTGAAATAAAAGAAAAATTCAAAGTGGAGACAAGAACCATTGCTGT
TGACTTTGCATCAGAAGATATTTATGATAAAATTAAAATGGGCTTGTCTGGTCTTGAAATCGGCATCTTAGTGAATAACG
TGGGAATGTCGTATGAGTATCCTGAATACTTTTTGGATGTTCCTGACTTGGACAATGTGATCAAGAAAAATGATAATATT
AATATTCTTTCTGTTTGTAAGATGACACAATTGGTACTGCCTGGCATGGTGGAAAGATCCAAAGGGGCTATTCTGAACAT
TTCGTCTGGCAGTGGCATGCTCCCTGTCCCACTGTTGACCATCTATTCTGCAACCAAGACTTTTGTAGATTTCTTCTCTC
GGTGCCTCCATGAGGAGTATAGGAGCAAGGGCGTCTTTGTGCAGAGTGTCCTGCCATACTTTGTAGCTACAAAACTGGCT
AAAATCCGGAAGCCAACTTTGGATAAGCCCTCTCCGGAGACGTTTGTGAAGTCTGCAATTAAAACAGTCGGCCTGCAATC
CCGAACCAATGGATACCTGATCCATGCTCTTATGGGCTCAATAATCTCAAACCTGCCTTCTTGGATTTATTTCAAAATAG
TCATGAATATGAACAAGTCTACACGGGCTCACCATCTGAAGAAAACCAAGAAGAAC

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 11 .61 RPM
SRP007412_cerebellum 8 .88 RPM
SRP007412_heart 9 .00 RPM
SRP007412_kidney 14 .25 RPM
SRP007412_liver 17 .01 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000011325 ortholog_one2many 1 retrogene
retro_cjac_2489,
Dipodomys ordii ENSDORG00000004834 ortholog_one2one 1 retrogene
retro_dord_561,
Homo sapiens ENSG00000149084 ortholog_one2one 1 retrogene
retro_hsap_3684,
Gorilla gorilla ENSGGOG00000002003 ortholog_one2one 1 retrogene
retro_ggor_2491,
Nomascus leucogenys ENSNLEG00000017959 ortholog_one2one 1 retrogene
retro_nleu_2273,
Oryctolagus cuniculus ENSOCUG00000016351 ortholog_one2one 1 retrogene
retro_ocun_1335,
Otolemur garnettii ENSOGAG00000009102 ortholog_one2one 1 retrogene
retro_ogar_3391,
Pan troglodytes ENSPTRG00000003522 ortholog_one2one 1 retrogene
retro_ptro_2499,
Ictidomys tridecemlineatus ENSSTOG00000005473 ortholog_one2one 1 retrogene
retro_itri_1099,
Tursiops truncatus ENSTTRG00000005103 ortholog_one2one 1 retrogene
retro_ttru_772,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_3021 78.80 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSPPYG00000003343 retrocopies