Parental gene:

ASS1, ENSGGOG00000010228

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:9:114000709..114059318(+)


>ENSGGOG00000010228
GCTATGTCCAGCAAAGGCTCCGTGGTTCTGGCCTACAGTGGCGGCCTGGACACCTCGTGCATCCTCGTGTGGCTGAAGGA
ACAAGGCTATGACGTCATTGCCTATCTGGCCAACATTGGCCAGAAGGAAGACTTCGAGGAAGCCAGGAAGAAGGCACTGA
AGCTTGGGGCCAAAAAGGTGTTCATTGAGGATGTCAGCAGGGAGTTTGTGGAGGAGTTCATCTGGCCGGCCATCCAGTCC
AGCGCACTGTATGAGGACCGCTACCTCCTGGGCACCTCTCTTGCCAGGCCCTGCATCGCCCGCAAACAAGTGGAAATCGC
CCAGCGGGAGGGGGCCAAGTATGTGTCCCACGGCGCCACAGGAAAGGGGAACGATCAGGTCCGGTTTGAGCTCAGCTGCT
ACTCGTTGGCCCCCCACATAAAGGTCATTGCTCCCTGGAGGATGCCCGAATTCTACAACCGGTTCAAGGGCCGCAATGAC
CTGATGGAGTACGCAAAGCAACACGGGATTCCCATCCCAGTCACTCCCAAGAACCCGTGGAGCATGGATGAGAACCTCAT
GCACATCAGCTACGAGGCTGGAATCCTGGAGAACCCCAAGAACCAAGCACCTCCAGGTCTCTACACGAAGACCCAGGACC
CAGCCAAAGCCCCCAACACCCCTGACATTCTTGAGATCGAGTTCAAAAAAGGGGTCCCTGTGAAGGTGACCAACGTCAAG
GATGGCACCACCCACCAGACCTCCTTGGAGCTCTTCATGTACCTGAACGAAGTCGCGGGCAAGCATGGCGTGGGCCGTAT
TGACATCGTGGAGAACCGCTTCATTGGAATGAAGTCCCGAGGTATCTACGAGACCCCAGCAGGCACCATCCTTTACCATG
CTCATTTAGACATCGAGGCCTTCACCATGGACCGGGAAGTGCGCAAAATCAAACAAGGCCTGGGCTTGAAATTTGCTGAG
CTGGTGTATACCGGTTTCTGGCACAGCCCTGAGTGTGAATTTGTCCGCCACTGCATCGCCAAGTCCCAGGAGCGAGTAGA
AGGGAAAGTGCAGGTGTCCGTCCTCAAGGGCCAGGTGTACATCCTCGGCCGGGAGTCCCCACTGTCTCTCTACAATGAGG
AGCTGGTGAGCATGAACGTGCAGGGTGATTATGAGCCGACTGATGCCACCGGGTTCATCAACATCAATTCCCTCAGGCTG
AAGGAATATCATCGTCTCCAGAGCAAGGTCACTGCCAAATAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 50 .35 RPM
SRP007412_cerebellum 33 .84 RPM
SRP007412_heart 20 .98 RPM
SRP007412_kidney 925 .89 RPM
SRP007412_liver 400 .50 RPM
SRP007412_testis 108 .68 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000020554 possible_ortholog 3 retrogenes
retro_cjac_1219, retro_cjac_4038, retro_cjac_4209,
Homo sapiens ENSG00000130707 ortholog_one2one 14 retrogenes
retro_hsap_2247, retro_hsap_2885, retro_hsap_3109, retro_hsap_3175, retro_hsap_3252, retro_hsap_3564, retro_hsap_3824, retro_hsap_4149, retro_hsap_4182, retro_hsap_4648, retro_hsap_4743, retro_hsap_4934, retro_hsap_820, retro_hsap_985,
Myotis lucifugus ENSMLUG00000006066 ortholog_one2many 2 retrogenes
retro_mluc_1058, retro_mluc_1304,
Mus musculus ENSMUSG00000076441 ortholog_many2many 1 retrogene
retro_mmus_135,
Nomascus leucogenys ENSNLEG00000012500 ortholog_one2one 13 retrogenes
retro_nleu_1088, retro_nleu_1245, retro_nleu_1317, retro_nleu_1381, retro_nleu_1390, retro_nleu_1424, retro_nleu_1701, retro_nleu_1792, retro_nleu_220, retro_nleu_253, retro_nleu_2680, retro_nleu_2764, retro_nleu_625,
Pongo abelii ENSPPYG00000019692 ortholog_one2one 13 retrogenes
retro_pabe_1963, retro_pabe_2390, retro_pabe_2637, retro_pabe_2696, retro_pabe_2937, retro_pabe_3069, retro_pabe_3197, retro_pabe_3422, retro_pabe_3460, retro_pabe_3521, retro_pabe_3522, retro_pabe_731, retro_pabe_834,
Pan troglodytes ENSPTRG00000021473 ortholog_one2one 14 retrogenes
retro_ptro_1590, retro_ptro_1951, retro_ptro_2101, retro_ptro_2199, retro_ptro_2268, retro_ptro_2421, retro_ptro_2602, retro_ptro_2821, retro_ptro_2836, retro_ptro_3064, retro_ptro_3158, retro_ptro_3298, retro_ptro_571, retro_ptro_762,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_671 87.23 79.42
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2. retro_ggor_787 87.23 100.00
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3. retro_ggor_1346 85.98 77.48
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4. retro_ggor_1675 77.92 74.33
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5. retro_ggor_2134 85.78 52.54
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6. retro_ggor_2403 86.51 99.76
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7. retro_ggor_2574 80.89 59.32
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8. retro_ggor_2787 87.23 100.00
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Download FASTA sequences of all ENSGGOG00000010228 retrocopies