Parental gene:

ASS1, ENSPPYG00000019692

Aliases:None
Description:argininosuccinate synthase [Source:RefSeq peptide;Acc:NP_001126812]
Organism:Orangutan (Pongo abelii)
Coordinates:9:127335059..127393633(+)


>ENSPPYG00000019692
ATGTCCAGCAAAGGCTCCGTGGTTCTGGCCTACAGTGGCGGCCTGGACACCTCATGCATCCTCGTGTGGCTGAAGGAACA
AGGCTATGACGTCATTGCCTATCTGGCCAACATTGGCCAGAAGGAAGACTTCGAGGAAGCCAGGAAGAAGGCACTGAAGC
TTGGGGCCAAAAAGGTGTTCATTGAGGATGTCAGCAGGGAGTTTGTGGAGGAGTTCATCTGGCCGGCCATCCAGTCCAGC
GCACTGTATGAGGACCGCTACCTCCTGGGCACCTCTCTCGCCAGGCCTTGCATTGCCCGCAAACAAGTGGAAATCGCCCA
GCAGGAGGGGGCCAAGTATGTGTCCCACGGCGCCACGGGAAAGGGGAACGATCAGGTCCGGTTTGAGCTCAGCTGCTACT
CACTGGCCCCCCAGATAAAGGTCATTGCTCCCTGGAGGATGCCCGAATTCTACAACCGGTTCAAGGGCCGCAATGACCTG
ATGGAATACGCAAAGCAACACGGGATTCCCATCCCGGTCACTCCCAAGAACCCATGGAGCATGGACGAGAACCTCATGCA
CATCAGCTACGAGGCTGGAATCCTGGAGAACCCCAAGAACCAAGCGCCTCCAGGTCTCTACACGAAGACCCAGGACCCAG
CCAAAGCCCCCAACACCCCTGACATTCTCGAGATCGAGTTCAAAAAAGGGGTCCCTGTGAAGGTGACCAACGTCAAGGAT
GGCACCACCCACCAGACCTCCTTGGAGCTCTTCATGTACCTGAACGAAGTCGCGGGCAAGCACGGCGTGGGCCGTATTGA
CATCGTGGAGAACCGCTTCATTGGAATGAAGTCCCGAGGTATCTACGAGACCCCAGCAGGCACCATCCTTTACCATGCTC
ATTTAGACATCGAGGCCTTCACCATGGACCGGGAAGTGCGCAAAATCAAACAAGGCCTGGGCTTGAAATTTGCTGAGCTG
GTGTATACTATGAACGTGCAGGGTGATTATGAGCCAACTGATGCCACCGGGTTCATCAACATCAATTCCCTCAGGCTGAA
GGAATATCATCGTCTCCAGAGCAAGGTCACTGCCAAATAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 45 .84 RPM
SRP007412_cerebellum 1 .09 RPM
SRP007412_heart 5 .81 RPM
SRP007412_kidney 673 .87 RPM
SRP007412_liver 332 .55 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000020554 possible_ortholog 3 retrogenes
retro_cjac_1219, retro_cjac_4038, retro_cjac_4209,
Homo sapiens ENSG00000130707 ortholog_one2one 14 retrogenes
retro_hsap_2247, retro_hsap_2885, retro_hsap_3109, retro_hsap_3175, retro_hsap_3252, retro_hsap_3564, retro_hsap_3824, retro_hsap_4149, retro_hsap_4182, retro_hsap_4648, retro_hsap_4743, retro_hsap_4934, retro_hsap_820, retro_hsap_985,
Gorilla gorilla ENSGGOG00000010228 ortholog_one2one 8 retrogenes
retro_ggor_1346, retro_ggor_1675, retro_ggor_2134, retro_ggor_2403, retro_ggor_2574, retro_ggor_2787, retro_ggor_671, retro_ggor_787,
Myotis lucifugus ENSMLUG00000006066 ortholog_one2many 2 retrogenes
retro_mluc_1058, retro_mluc_1304,
Mus musculus ENSMUSG00000076441 ortholog_many2many 1 retrogene
retro_mmus_135,
Nomascus leucogenys ENSNLEG00000012500 ortholog_one2one 13 retrogenes
retro_nleu_1088, retro_nleu_1245, retro_nleu_1317, retro_nleu_1381, retro_nleu_1390, retro_nleu_1424, retro_nleu_1701, retro_nleu_1792, retro_nleu_220, retro_nleu_253, retro_nleu_2680, retro_nleu_2764, retro_nleu_625,
Pan troglodytes ENSPTRG00000021473 ortholog_one2one 14 retrogenes
retro_ptro_1590, retro_ptro_1951, retro_ptro_2101, retro_ptro_2199, retro_ptro_2268, retro_ptro_2421, retro_ptro_2602, retro_ptro_2821, retro_ptro_2836, retro_ptro_3064, retro_ptro_3158, retro_ptro_3298, retro_ptro_571, retro_ptro_762,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_731 85.49 89.97
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2. retro_pabe_834 87.12 89.97
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3. retro_pabe_1963 80.57 68.25
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4. retro_pabe_2390 83.15 76.88
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5. retro_pabe_2637 84.67 72.42
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6. retro_pabe_2696 80.87 50.42
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7. retro_pabe_2937 87.35 89.97
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8. retro_pabe_3069 86.50 89.69
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9. retro_pabe_3197 82.31 77.99
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10. retro_pabe_3422 82.00 81.06
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11. retro_pabe_3460 73.23 70.47
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12. retro_pabe_3521 84.92 89.97
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13. retro_pabe_3522 82.23 89.97
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Download FASTA sequences of all ENSPPYG00000019692 retrocopies