Parental gene:

RPS23, ENSGGOG00000025014

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:5:64889995..64892856(-)


>ENSGGOG00000025014
ATGGGCAAGTGTCGTGGACTTCGTACTGCTAGGAAGCTCCGTAGTCACCGACGAGACCAGAAGTGGCATGATAAACAGTA
TAAGAAAGCTCATTTGGGCACAGCCCTAAAGGCCAACCCTTTTGGAGGTGCTTCTCATGCAAAAGGAATCGTGCTGGAAA
AAGTAGGAGTTGAAGCCAAACAGCCAAATTCTGCCATTAGGAAGTGTGTAAGGGTCCAGCTGATCAAGAATGGCAAGAAA
ATCACAGCCTTTGTACCCAATGACGGTTGCTTGAACTTTATTGAGGAAAATGATGAAGTTCTGGTTGCTGGATTTGGTCG
CAAAGGTCATGCTGTTGGTGATATTCCTGGAGTCCGCTTTAAGGTTGTCAAAGTAGCCAATGTTTCTCTTTTGGCCCTAT
ACAAAGGCAAGAAGGAAAGACCAAGATCATAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 86 .75 RPM
SRP007412_cerebellum 89 .63 RPM
SRP007412_heart 50 .59 RPM
SRP007412_kidney 265 .61 RPM
SRP007412_liver 271 .35 RPM
SRP007412_testis 118 .93 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000013358 possible_ortholog 3 retrogenes
retro_btau_173, retro_btau_205, retro_btau_80,
Callithrix jacchus ENSCJAG00000011247 possible_ortholog 2 retrogenes
retro_cjac_126, retro_cjac_256,
Homo sapiens ENSG00000186468 ortholog_one2one 6 retrogenes
retro_hsap_1778, retro_hsap_2940, retro_hsap_3107, retro_hsap_3287, retro_hsap_3989, retro_hsap_4697,
Macaca mulatta ENSMMUG00000003578 possible_ortholog 4 retrogenes
retro_mmul_1239, retro_mmul_1974, retro_mmul_2305, retro_mmul_852,
Monodelphis domestica ENSMODG00000020255 ortholog_one2one 3 retrogenes
retro_mdom_1518, retro_mdom_1612, retro_mdom_395,
Mustela putorius furo ENSMPUG00000008114 ortholog_one2one 1 retrogene
retro_mputfur_1298,
Nomascus leucogenys ENSNLEG00000013203 ortholog_one2one 3 retrogenes
retro_nleu_1353, retro_nleu_1909, retro_nleu_764,
Oryctolagus cuniculus ENSOCUG00000010363 possible_ortholog 2 retrogenes
retro_ocun_195, retro_ocun_95,
Rattus norvegicus ENSRNOG00000016580 possible_ortholog 12 retrogenes
retro_rnor_100, retro_rnor_1394, retro_rnor_149, retro_rnor_1691, retro_rnor_1941, retro_rnor_1959, retro_rnor_1982, retro_rnor_2119, retro_rnor_2182, retro_rnor_2492, retro_rnor_525, retro_rnor_559,
Sarcophilus harrisii ENSSHAG00000008347 possible_ortholog 2 retrogenes
retro_shar_257, retro_shar_348,
Sus scrofa ENSSSCG00000014133 ortholog_one2one 1 retrogene
retro_sscr_92,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_286 99.30 100.00
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2. retro_ggor_1316 69.29 86.01
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3. retro_ggor_2038 68.53 99.30
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4. retro_ggor_2131 70.97 65.03
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5. retro_ggor_2237 83.48 77.62
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6. retro_ggor_2677 84.03 100.00
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Download FASTA sequences of all ENSGGOG00000025014 retrocopies