Parental gene:

ACTC1, ENSLACG00000011801

Aliases:None
Description:None
Organism:Coelacanth (Latimeria chalumnae)
Coordinates:JH127561.1:637957..642395(-)


>ENSLACG00000011801
ATGTGTGACGACGAGGAGACCACCGCTTTGGTTTGCGATAACGGCTCCGGTCTGGTGAAGGCTGGCTTCGCCGGAGATGA
TGCCCCCCGCGCCGTCTTCCCCTCCATCGTGGGTCGCCCCCGCCACCAGGGTGTCATGGTAGGTATGGGTCAGAAAGACT
CTTACGTAGGCGATGAGGCTCAAAGCAAGAGAGGTATCCTGACCCTGAAATATCCCATCGAGCACGGTATTATTACCAAT
TGGGATGATATGGAGAAGATTTGGCACCACACCTTCTACAATGAACTTCGTGTGGCCCCTGAGGAACACCCCACCCTGCT
TACTGAGGCTCCCCTCAATCCCAAAGCCAACAGAGAGAAGATGACTCAGATCATGTTCGAGACTTTCAATGTCCCAGCCA
TGTATGTGGCCATCCAGGCTGTCCTGTCCCTGTACGCCTCTGGTCGTACCACAGGTATTGTCTTGGATTCTGGTGATGGT
GTCACCCACAATGTCCCCATCTATGAAGGTTACGCCTTGCCCCATGCCATCATGCGTCTTGACCTGGCCGGTAGGGACCT
GACTGACTACCTCATGAAGATCCTCACTGAGCGTGGCTATTCCTTTGTAACAACTGCTGAACGTGAAATTGTCCGTGATA
TCAAGGAAAAATTGTGCTATGTGGCTTTGGACTTTGAGAATGAAATGGCCACTGCCGCCTCTTCCTCCTCCCTGGAGAAG
AGTTATGAGTTGCCCGATGGCCAGGTCATCACCATTGGCAATGAACGTTTCCGTTGCCCTGAAACTCTTTTCCAACCATC
CTTCATTGGTATGGAGTCTGCTGGTATTCATGAGACCACCTACAACAGTATTATGAAGTGTGACATTGATATTCGTAAGG
ATCTGTATGCTAACAATGTCCTGTCTGGTGGTACCACTATGTATCCTGGTATTGCTGACCGTATGCAGAAGGAAATAACT
GCCCTGGCCCCCAGTACCATGAAGATCAAGATTATCGCTCCACCTGAACGCAAGTATTCTGTCTGGATTGGTGGCTCCAT
CTTAGCCTCTTTGTCCACCTTCCAGCAGATGTGGATCAGCAAACAGGAATATGATGAGGCTGGCCCATCCATTGTTCACC
GTAAATGCTTCTAA

Library Parental gene expression (RPM)
DRP000627_pectoral_fin 5 .20 RPM
DRP000627_kidney 21 .00 RPM
DRP000627_pelvic_fin 2 .64 RPM
DRP000627_pharynx 0 .02 RPM
DRP000627_gill 0 .29 RPM
DRP000627_tail_muscle 0 .13 RPM



Species Parental gene accession Homology type Retrogenes number
Oryctolagus cuniculus ENSOCUG00000004074 ortholog_one2one 1 retrogene
retro_ocun_38,
Pongo abelii ENSPPYG00000006318 ortholog_one2one 1 retrogene
retro_pabe_1317,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_lcha_19 98.41 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSLACG00000011801 retrocopies