Parental gene:

NDUFB10, ENSLACG00000013152

Aliases:None
Description:None
Organism:Coelacanth (Latimeria chalumnae)
Coordinates:JH127454.1:815843..826043(+)


>ENSLACG00000013152
ATGCCGGATGATTGGGATAAAGATGTGTATCCGGAACCTCCTCGCCGGACCCCGGTGGTTAAGAAAGAGACGAACCTGCC
CAACCCGGCTTCAATTGCAACCAACATCTTCTATTATGCGGTGGATCAGCCGGTCACTTACTTTCGAGAATGGATGGAAC
GCCAGCACTCAAGGAACAAATTTTACTACTATCACCGGCAGTTCCGCCGTGTGCCAGACTTGACAGAATGTCAGACGGAT
GATTACTTGTGCCTGTATGAGGCAGAGATGCAGTGGAGGAGAGACCACAAAGTTGATCAAGAGATTGTGAAGATCGTCCA
GGACAGACTGAAAGCCTGCCAGCAAAGAGAAGGAAGTAGCTACCTGCAGAACTGTGCAAAGGAAGTGGAACAATTTCGAC
AAGTTGCAAAGGGTTACCAATCTAGATATGGAGACCTCGGTGCATATGGTAGTGCTAGAAAATGCCTTATGAAGCAAAAG
CACAGAATGATCAAAGAGAGAGAAAAGGCAGCAGAGGCAGTATAA

Library Parental gene expression (RPM)
DRP000627_pectoral_fin 51 .34 RPM
DRP000627_kidney 48 .42 RPM
DRP000627_pelvic_fin 56 .43 RPM
DRP000627_pharynx 30 .40 RPM
DRP000627_gill 27 .70 RPM
DRP000627_tail_muscle 22 .41 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000019476 ortholog_one2one 1 retrogene
retro_cfam_1861,
Echinops telfairi ENSETEG00000017154 ortholog_one2one 1 retrogene
retro_etel_1955,
Felis catus ENSFCAG00000011738 ortholog_one2many 1 retrogene
retro_fcat_307,
Homo sapiens ENSG00000140990 ortholog_one2one 2 retrogenes
retro_hsap_1573, retro_hsap_3801,
Gorilla gorilla ENSGGOG00000009367 ortholog_one2one 2 retrogenes
retro_ggor_1198, retro_ggor_2555,
Macaca mulatta ENSMMUG00000029268 ortholog_one2one 1 retrogene
retro_mmul_2218,
Mus musculus ENSMUSG00000040048 ortholog_one2one 1 retrogene
retro_mmus_2566,
Nomascus leucogenys ENSNLEG00000008867 ortholog_one2one 1 retrogene
retro_nleu_1740,
Pongo abelii ENSPPYG00000006974 ortholog_one2one 2 retrogenes
retro_pabe_1297, retro_pabe_3106,
Pan troglodytes ENSPTRG00000007618 ortholog_one2one 2 retrogenes
retro_ptro_1060, retro_ptro_2578,
Rattus norvegicus ENSRNOG00000014568 ortholog_one2many 1 retrogene
retro_rnor_1056,
Sus scrofa ENSSSCG00000030328 ortholog_one2one 1 retrogene
retro_sscr_689,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_lcha_100 70.89 90.80
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Download FASTA sequences of all ENSLACG00000013152 retrocopies