Parental gene: | LSM4, ENSLACG00000015861 |
| Aliases: | None |
| Description: | None |
| Organism: | Coelacanth (Latimeria chalumnae) |
| Coordinates: | JH126715.1:1377890..1396100(-) |
>ENSLACG00000015861
ATGCTTCCATTATCATTACTGAAGACGGCTCAGAATCATCCTATGTTAGTGGAGTTGAAGAATGGGGAAACGTACAATGG
TCACTTGGTCAGCTGTGATAACTGGATGAACATCAACCTGAGAGAAGTTATCTGTACGTCCAGGGATGGTGACAAATTTT
GGAGGATGCCAGAGTGCTACATACGCGGGAGCACCATTAAATACCTGCGAATTCCAGATGAAATTATTGACATGGTAAAG
GAGGAAGTAGTGTCCAAGGGAAGAGGCCGGGGAGGAATGCAGCAACAGAAACAGCAGCAAAAAGGTCGTGGAGCTGGGGG
TGCGGCACGAGGTGTATTTGGTGGCCGAGGACGGGGAATACCTGGTAGTGGCAGAGGGCAGCAGGAAAAGAAACCCGGAA
AACAGTTGGGCGGAAAGCAGTGA
ATGCTTCCATTATCATTACTGAAGACGGCTCAGAATCATCCTATGTTAGTGGAGTTGAAGAATGGGGAAACGTACAATGG
TCACTTGGTCAGCTGTGATAACTGGATGAACATCAACCTGAGAGAAGTTATCTGTACGTCCAGGGATGGTGACAAATTTT
GGAGGATGCCAGAGTGCTACATACGCGGGAGCACCATTAAATACCTGCGAATTCCAGATGAAATTATTGACATGGTAAAG
GAGGAAGTAGTGTCCAAGGGAAGAGGCCGGGGAGGAATGCAGCAACAGAAACAGCAGCAAAAAGGTCGTGGAGCTGGGGG
TGCGGCACGAGGTGTATTTGGTGGCCGAGGACGGGGAATACCTGGTAGTGGCAGAGGGCAGCAGGAAAAGAAACCCGGAA
AACAGTTGGGCGGAAAGCAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| DRP000627_pectoral_fin | 6 .54 RPM |
| DRP000627_kidney | 1 .69 RPM |
| DRP000627_pelvic_fin | 4 .21 RPM |
| DRP000627_pharynx | 1 .19 RPM |
| DRP000627_gill | 1 .63 RPM |
| DRP000627_tail_muscle | 1 .19 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000014900 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000007762 | ortholog_one2many | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000004010 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_lcha_28 | 69.23 | 55.71 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSLACG00000015861 retrocopies