Parental gene: | MAK16, ENSLACG00000018758 |
| Aliases: | None |
| Description: | None |
| Organism: | Coelacanth (Latimeria chalumnae) |
| Coordinates: | JH126583.1:4359465..4374345(+) |
>ENSLACG00000018758
ATGCAGCACGACGATGTGATATGGGACATTATAGGAAACAAACAGTTTTGTTCCTTTAAAGTGAGAACAAAGACTCAAAG
CTTCTGCCGGAATGAGTATAACATTACAGGCCTGTGTAACCGTTCATCATGTCCCCTTGCCAACAGTCAGTATGCAACTG
TCAGAGAGGAGAAAGGCCAGTGTTACCTGTATATGAAGATGATAGAAAGGGCAGCATTTCCAGCCCGCTTGTGGGAAAGG
GTAAAGCTAAGTAAGAATTATGAAAAGGCGTTGGAACAGATTGATGAAAACCTAATTTACTGGCCACGCTTCATCAGACA
TAAATGCAAACAGCGGTTTACCAAAATCACACAGTATCTTATCAGAATAAGGAAGCTTACACTCAAACGACAGCGAAAAC
TTGTACCTTTAAGTAGGAAGGTTGAAAGAAGAGAAAAACGGAGAGAGGAAAAAGCTCTGGTTGCCGCTCAGTTGGACAAT
GCTATCGAGAAAGAGCTGCTGGAGAGGTTGAAACAAGGAGCATATGGCGATATCTACAATTTCCCAATCCATGCCTTTGA
TAAGGCTCTAGAGCGGCAAGATGAGGAGAGCGAAACAGATTCTTCTGAGGGGGAAGAGGAGGTGGAAGACGAGGACTCTG
GACAGAGAGAATTTGTTGAAGATGAAGAGATCGATGAGAGTGACATCAGTGACTTTGAGGACATGGATAAACTGAATGAG
CTCAGCAATGAAGAGCAATCTTCAAGTGCCGAGGAGGAGTCTGGGGACGAGGTAGAAGAGGAGAAAGAAGGCCATGCTGT
ATCAAAGTCTAAGGGCAAAACGCCCTTAAAAGGATCAATTAGGAAGAAACGAGCATATGTAGAAATGGAATATGAACAAG
AGACTGAACCAACAGCAAAGGCAAAAACAACATAA
ATGCAGCACGACGATGTGATATGGGACATTATAGGAAACAAACAGTTTTGTTCCTTTAAAGTGAGAACAAAGACTCAAAG
CTTCTGCCGGAATGAGTATAACATTACAGGCCTGTGTAACCGTTCATCATGTCCCCTTGCCAACAGTCAGTATGCAACTG
TCAGAGAGGAGAAAGGCCAGTGTTACCTGTATATGAAGATGATAGAAAGGGCAGCATTTCCAGCCCGCTTGTGGGAAAGG
GTAAAGCTAAGTAAGAATTATGAAAAGGCGTTGGAACAGATTGATGAAAACCTAATTTACTGGCCACGCTTCATCAGACA
TAAATGCAAACAGCGGTTTACCAAAATCACACAGTATCTTATCAGAATAAGGAAGCTTACACTCAAACGACAGCGAAAAC
TTGTACCTTTAAGTAGGAAGGTTGAAAGAAGAGAAAAACGGAGAGAGGAAAAAGCTCTGGTTGCCGCTCAGTTGGACAAT
GCTATCGAGAAAGAGCTGCTGGAGAGGTTGAAACAAGGAGCATATGGCGATATCTACAATTTCCCAATCCATGCCTTTGA
TAAGGCTCTAGAGCGGCAAGATGAGGAGAGCGAAACAGATTCTTCTGAGGGGGAAGAGGAGGTGGAAGACGAGGACTCTG
GACAGAGAGAATTTGTTGAAGATGAAGAGATCGATGAGAGTGACATCAGTGACTTTGAGGACATGGATAAACTGAATGAG
CTCAGCAATGAAGAGCAATCTTCAAGTGCCGAGGAGGAGTCTGGGGACGAGGTAGAAGAGGAGAAAGAAGGCCATGCTGT
ATCAAAGTCTAAGGGCAAAACGCCCTTAAAAGGATCAATTAGGAAGAAACGAGCATATGTAGAAATGGAATATGAACAAG
AGACTGAACCAACAGCAAAGGCAAAAACAACATAA
| Library | Parental gene expression (RPM) |
|---|---|
| DRP000627_pectoral_fin | 5 .28 RPM |
| DRP000627_kidney | 5 .63 RPM |
| DRP000627_pelvic_fin | 8 .60 RPM |
| DRP000627_pharynx | 6 .01 RPM |
| DRP000627_gill | 4 .40 RPM |
| DRP000627_tail_muscle | 5 .46 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000009081 | ortholog_one2one | 5 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000008424 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000006945 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000002758 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000008735 | ortholog_one2one | 3 retrogenes | |
| Sus scrofa | ENSSSCG00000015832 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_lcha_67 | 100.00 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSLACG00000018758 retrocopies