Parental gene: | OSTC, ENSLAFG00000026381 |
| Aliases: | None |
| Description: | oligosaccharyltransferase complex subunit (non-catalytic) [Source:HGNC Symbol;Acc:24448] |
| Organism: | Elephant (Loxodonta africana) |
| Coordinates: | scaffold_14:17172062..17183638(+) |
>ENSLAFG00000026381
ATGGAGACTTTGTACCGAGTCCCGTTCTTAGTGCTTGAATGCCCCAACCTGAAGCTGAAGAAGCCGCCCTGGGTGCACAT
GCCGTCGGCCATGACGGTGTACGCTCTGGTGGTAGTGTCTTACTTTCTCATCACCGGAGGAATAATTTATGATGTTATTG
TGGAACCTCCAAGTGTTGGCTCTATGACTGATGAACATGGGCATCAGAGGCCAGTAGCTTTCTTGGCTTACAGAGTAAAT
GGACAATATATTATGGAAGGACTCGCATCCAGCTTCCTGTTTACAATGGGAGGTTTAGGTTTCATAATCCTGGACCGATC
CAATGCACCAAACATTCCAAAACTCAACCGATTTCTTCTTTTGTTCATTGGATTCGTCTGTGTCCTGTTGAGTTTTTTTA
TGGCTAGAGTATTCATGAGAATGAAACTGCCGTTTTTTCTTTTAGGA
ATGGAGACTTTGTACCGAGTCCCGTTCTTAGTGCTTGAATGCCCCAACCTGAAGCTGAAGAAGCCGCCCTGGGTGCACAT
GCCGTCGGCCATGACGGTGTACGCTCTGGTGGTAGTGTCTTACTTTCTCATCACCGGAGGAATAATTTATGATGTTATTG
TGGAACCTCCAAGTGTTGGCTCTATGACTGATGAACATGGGCATCAGAGGCCAGTAGCTTTCTTGGCTTACAGAGTAAAT
GGACAATATATTATGGAAGGACTCGCATCCAGCTTCCTGTTTACAATGGGAGGTTTAGGTTTCATAATCCTGGACCGATC
CAATGCACCAAACATTCCAAAACTCAACCGATTTCTTCTTTTGTTCATTGGATTCGTCTGTGTCCTGTTGAGTTTTTTTA
TGGCTAGAGTATTCATGAGAATGAAACTGCCGTTTTTTCTTTTAGGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000011611 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000016002 | possible_ortholog | 3 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000011172 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000198856 | ortholog_one2one | 7 retrogenes | |
| Gorilla gorilla | ENSGGOG00000026873 | possible_ortholog | 6 retrogenes | |
| Myotis lucifugus | ENSMLUG00000000478 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000020599 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000012929 | possible_ortholog | 11 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000011056 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000033684 | possible_ortholog | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000024222 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000003446 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_lafr_17 | 89.26 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_lafr_222 | 75.36 | 91.28 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_lafr_231 | 79.47 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_lafr_444 | 81.71 | 55.03 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_lafr_549 | 75.50 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_lafr_618 | 76.12 | 88.59 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_lafr_1046 | 76.47 | 89.26 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSLAFG00000026381 retrocopies