Parental gene:

OSTC, ENSNLEG00000012929

Aliases:None
Description:None
Organism:Gibbon (Nomascus leucogenys)
Coordinates:GL397271.1:23226895..23244490(-)


>ENSNLEG00000012929
ATGGAGACTTTGTACCGTGTCCCGTTCTTAGTGCTCGAATGTCCCAACCTGAAGCTGAAGAAGCCGCCCTGGTTACACAT
GCCGTCGGCCATGACTGTGTATGCTCTGGTGGTGGTGTCTTACTTCCTCATCACCGGAGGAATAATTTATGATGTTATTG
TTGAACCTCCAAGTGTCGGCTCTATGACTGATGAACATGGGCATCAGAGGCCAGTAGCTTTCTTGGCCTACAGAGTAAAT
GGACAGTATATTATGGAAGGACTTGCATCCAGCTTCCTATTTACAATGGGAGGTTTAGGTTTCATAATCCTGGACCGATC
GAATGCACCAAATATCCCAAAACTCAATAGATTTCTTCTTCTGTTCATTGGATTCGTCTGTGTCCTATTGAGTTTTTTCA
TGGCTAGAGTATTCATGAGAATGAAACTGCCGGGCTATCTGATGGGTTAG

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000016002 ortholog_one2many 3 retrogenes
retro_cjac_121, retro_cjac_2981, retro_cjac_324,
Gorilla gorilla ENSGGOG00000026873 ortholog_one2one 6 retrogenes
retro_ggor_1457, retro_ggor_2060, retro_ggor_215, retro_ggor_2427, retro_ggor_370, retro_ggor_385,
Loxodonta africana ENSLAFG00000026381 possible_ortholog 7 retrogenes
retro_lafr_1046, retro_lafr_17, retro_lafr_222, retro_lafr_231, retro_lafr_444, retro_lafr_549, retro_lafr_618,
Oryctolagus cuniculus ENSOCUG00000011056 possible_ortholog 2 retrogenes
retro_ocun_1318, retro_ocun_7,
Otolemur garnettii ENSOGAG00000033684 ortholog_one2one 1 retrogene
retro_ogar_578,
Pan troglodytes ENSPTRG00000024222 possible_ortholog 1 retrogene
retro_ptro_34,
Rattus norvegicus ENSRNOG00000023322 possible_ortholog 1 retrogene
retro_rnor_2297,
Ictidomys tridecemlineatus ENSSTOG00000021644 possible_ortholog 6 retrogenes
retro_itri_1211, retro_itri_1386, retro_itri_15, retro_itri_1571, retro_itri_789, retro_itri_863,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_nleu_297 87.77 93.29
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2. retro_nleu_474 96.64 100.00
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3. retro_nleu_923 88.67 99.33
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4. retro_nleu_1372 82.00 100.00
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5. retro_nleu_1436 94.00 100.00
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6. retro_nleu_2026 89.26 100.00
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7. retro_nleu_2265 83.05 78.52
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8. retro_nleu_2274 90.60 100.00
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9. retro_nleu_2665 97.32 100.00
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10. retro_nleu_2796 82.00 100.00
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11. retro_nleu_2826 92.59 90.60
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Download FASTA sequences of all ENSNLEG00000012929 retrocopies