Parental gene:

CDK2AP1, ENSMMUG00000000434

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:11:124540596..124546902(-)


>ENSMMUG00000000434
GCTGGGAGTGTCCACTCTCCTTCCACCAGCATGGCGTCTTCACAGTACCGCCAGCTGCTCAGTGACTACGGGCCACCATC
CCTAGGCTACACCCAGGGAACTGGGAACAGCCAAGTGCCCCAAAGCAAATACGCGGAGCTGCTGGCCATCATTGAAGAGC
TGGGGAAGGAGATCAGACCCACGTACGCGGGGAGCAAGAGTGCCATGGAGAGACTGAAGCGCGGCATCATTCACGCTAGA
GGACTGGTTCGGGAGTGCTTAGCAGAAACTGAACGGAATGCCAGATCCTAG

Library Parental gene expression (RPM)
SRP007412_brain 50 .09 RPM
SRP007412_brain_prefrontal_cortex 40 .06 RPM
SRP007412_cerebellum 52 .69 RPM
SRP007412_heart 39 .04 RPM
SRP007412_kidney 25 .94 RPM
SRP007412_liver 13 .81 RPM
SRP007412_testis 41 .76 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000015147 possible_ortholog 1 retrogene
retro_amel_19,
Choloepus hoffmanni ENSCHOG00000010939 ortholog_one2one 1 retrogene
retro_chof_56,
Gorilla gorilla ENSGGOG00000009567 possible_ortholog 1 retrogene
retro_ggor_1968,
Macropus eugenii ENSMEUG00000009438 ortholog_one2one 12 retrogenes
retro_meug_1101, retro_meug_1112, retro_meug_1218, retro_meug_1366, retro_meug_1509, retro_meug_1565, retro_meug_2116, retro_meug_377, retro_meug_404, retro_meug_669, retro_meug_836, retro_meug_868,
Macaca mulatta ENSMMUG00000011827 within_species_paralog 5 retrogenes
retro_mmul_1712, retro_mmul_640, retro_mmul_728, retro_mmul_730, retro_mmul_763,
Monodelphis domestica ENSMODG00000012451 ortholog_one2one 2 retrogenes
retro_mdom_1845, retro_mdom_611,
Mus musculus ENSMUSG00000029394 possible_ortholog 1 retrogene
retro_mmus_125,
Rattus norvegicus ENSRNOG00000001070 possible_ortholog 3 retrogenes
retro_rnor_1717, retro_rnor_1718, retro_rnor_1753,
Sarcophilus harrisii ENSSHAG00000015009 ortholog_one2one 1 retrogene
retro_shar_366,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_1507 71.08 84.38
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Download FASTA sequences of all ENSMMUG00000000434 retrocopies