Parental gene:

TMEM183A, ENSMMUG00000000801

Aliases:None
Description:transmembrane protein 183A [Source:RefSeq peptide;Acc:NP_001253210]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:1:167416927..167433775(-)


>ENSMMUG00000000801
ATGGCCCGGGGGCCCGGCCCGCTAGGCAGGCCTCGCCCGGATACGGTCGCCATGCCCAAGAGAGGAAAGCGACTCAAGTT
CCGGGCCCACGACGCCTGTTCCGGCCGAGTGACCGTGGCGGATTACGCCAACTCGGATCCGGCGGTCGTGAGGTCTGGAC
GAGTCAAGAAAGCGGTAGCCAACGCTGTTCAGCAGGAAGTAAAATCTCTTTGTGGCTTGGAAGCCTCTCAGGTTCCTGCA
GAGGAAGCTCTTTCTGGGGCTGGTGAGCCCTGTGACATCATCGACAGCAGTGATGAGATGGATGCCCAGGAGGAAAGCAT
CCATGAGAGAACTGTCTCCAGAAAAAAGAAAAGCAAGAGGCACAAAGAACTGGACGGGGCTGGAGGAGAAGAGTATCCCA
TGGATATTTGGCTGTTGCTGGCCTCCTATATCCGTCCTGAGGACATTGTGAATTTTTCCCTGATTTGTAAGAATGCCTGG
ACTGTCACTTGCACTGCTGCCTTTTGGACCAGGTTGTACCGAAGGCACTACACGCTGGATGCTTCCCTGCCTTTGCGTCT
GCGACCAGAGTCAATGGAGAAGCTGCGCTGTCTCCGGGCTTGTGTGATCCGATCTCTGTACCATATGTATGAGCCATTTG
CTGCTCGAATCTCCAAGAATCCAGCCATTCCAGAAAGCACCCCCAGCACATTAAAGAATTCCAAATGCTTACTTTTCTGG
TGCAGAAAGATTGTTGGGAACAGACAGGAACCAATGTGGGAATTCAACTTCAAGTTCAAAAAACAGTCCCCTAGGTTAAA
GAGCAAGTGTACAGGAGGATTGCAGCCTCCCGTTCAGTACGAAGATGTTCATACCAATCCAGACCAGGACTGCTGCCTAC
TGCAGGTCACGACCCTCAATTTCATCTTTATTCCGATTGTCATGGGAATGATATTTACTCTGTTTACTATCAATGTGAGC
ACGGACATGCGGCATCATCGAGTGAGACTGGTGTTCCAAGATTCCCCTGTCCATGGTGGTCGGAAACTGCGCAGTGAGCA
GGGTGTGCAAGTCATCCTGGACCCAGTGCACAGCGTTCGGCTCTTTGACTGGTGGCACCCTCAGTACCCATTCTCCCTGA
GAGCATAG

Library Parental gene expression (RPM)
SRP007412_brain 67 .68 RPM
SRP007412_brain_prefrontal_cortex 94 .96 RPM
SRP007412_cerebellum 56 .63 RPM
SRP007412_heart 14 .90 RPM
SRP007412_kidney 39 .67 RPM
SRP007412_liver 38 .63 RPM
SRP007412_testis 64 .87 RPM



Species Parental gene accession Homology type Retrogenes number
Echinops telfairi ENSETEG00000008318 possible_ortholog 1 retrogene
retro_etel_1835,
Felis catus ENSFCAG00000013106 ortholog_many2many 1 retrogene
retro_fcat_3,
Homo sapiens ENSG00000163444 ortholog_one2many 3 retrogenes
retro_hsap_2808, retro_hsap_2863, retro_hsap_3157,
Gorilla gorilla ENSGGOG00000009834 ortholog_one2many 2 retrogenes
retro_ggor_1358, retro_ggor_2533,
Loxodonta africana ENSLAFG00000018443 ortholog_one2many 1 retrogene
retro_lafr_149,
Nomascus leucogenys ENSNLEG00000018106 ortholog_one2many 2 retrogenes
retro_nleu_2541, retro_nleu_2663,
Otolemur garnettii ENSOGAG00000000911 ortholog_many2many 1 retrogene
retro_ogar_3209,
Pongo abelii ENSPPYG00000000340 ortholog_one2many 2 retrogenes
retro_pabe_1333, retro_pabe_2627,
Pan troglodytes ENSPTRG00000001864 ortholog_one2many 2 retrogenes
retro_ptro_1902, retro_ptro_2278,
Rattus norvegicus ENSRNOG00000003594 ortholog_one2many 2 retrogenes
retro_rnor_1954, retro_rnor_2386,
Sus scrofa ENSSSCG00000015473 ortholog_one2many 1 retrogene
retro_sscr_879,
Ictidomys tridecemlineatus ENSSTOG00000012466 ortholog_one2many 1 retrogene
retro_itri_421,
Tarsius syrichta ENSTSYG00000007009 ortholog_one2many 1 retrogene
retro_tsyr_717,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_1532 91.49 99.73
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Download FASTA sequences of all ENSMMUG00000000801 retrocopies