Parental gene:

NUP35, ENSMMUG00000004140

Aliases:None
Description:nucleoporin NUP53 [Source:RefSeq peptide;Acc:NP_001253180]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:12:46729157..46765543(+)


>ENSMMUG00000004140
ATGGCAGCCTTTGCCGTGGAACCTCAGGGGCCCGCGTTAGGATCTGAACCAATGATGCTGGGTTCACCCACATCTCCAAA
GCCAGGAGTTAATGCCCAGTTCTTACCTGGATTTTTAATGGGGGATTTGCCAGCTCCGGTGACTCCCCAACCTCGATCAA
TTAGTGGCCCTTCGGTAGGAGTAATGGAAATGAGATCACCTTTACTTGCAGGTGGGTCACCACCACAACCAGTTTTACCA
GCTCATAAAGATAAAAGTGGCGCTCCACCAGTTAGAAGTATATATGATGACATTTCTAGCCCAGGACTTGGATCAACACC
TTTAACTTCAAGAAGACAGCCAAACATTTCAGTAATGCAGAGTCCTCTTGTTGGAGTTACATCTACCCCTGGAACAGGCC
AAAGTATGTTTAGTCCAGCAAGTATCGGTCAGCCACGAAAGACGACATTATCTCCTGCCCAGTTGGATCCTTTTTATACT
CAAGGAGATTCTTTGACTTCAGAAGATCACCTCGATGACTCTTGGGTGACTGTGTTTGGGTTTCCTCAAGCATCTGCGTC
CTACATATTATTACAATTTGCACAGTATGGGAATATCTTAAAACATGTGATGTCTAATACAGGAAATTGGATGCATATTC
GTTACCAATCTAAACTGCAGGCTCGGAAAGCCTTAAGCAAAGATGGGAGGATTTTTGGAGAATCCATCATGATTGGTGTA
AAACCATGTATTGACAAAAGTGTTATGGAAAGCAGTGACAGATGTGCTTTATCATCTCCATCTTTAGCCTTTACACCACC
AATCAAAACTCTAGGTACACCAACACAACCTGGAAGTACTCCTAGGATTTCTACCATGAGACCTCTTGCTACAGCATACA
AAGCCTCTACTAGTGATTATCAGGTTATTTCTGACAGACAAACGCCAAAAAAAGATGAAAGTCTTGTATCCAAAGCAATG
GAGTACATGTTTGGCTGGTAG

Library Parental gene expression (RPM)
SRP007412_brain 9 .19 RPM
SRP007412_brain_prefrontal_cortex 5 .95 RPM
SRP007412_cerebellum 9 .82 RPM
SRP007412_heart 5 .18 RPM
SRP007412_kidney 11 .97 RPM
SRP007412_liver 4 .71 RPM
SRP007412_testis 54 .05 RPM



Species Parental gene accession Homology type Retrogenes number
Erinaceus europaeus ENSEEUG00000008469 ortholog_one2one 1 retrogene
retro_eeur_666,
Homo sapiens ENSG00000163002 ortholog_one2one 1 retrogene
retro_hsap_551,
Gorilla gorilla ENSGGOG00000009919 ortholog_one2one 1 retrogene
retro_ggor_500,
Nomascus leucogenys ENSNLEG00000006423 ortholog_one2one 1 retrogene
retro_nleu_2019,
Pongo abelii ENSPPYG00000012998 ortholog_one2one 1 retrogene
retro_pabe_508,
Pan troglodytes ENSPTRG00000012711 ortholog_one2one 1 retrogene
retro_ptro_414,
Ictidomys tridecemlineatus ENSSTOG00000000711 ortholog_one2one 2 retrogenes
retro_itri_755, retro_itri_760,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_2387 84.14 93.87
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Download FASTA sequences of all ENSMMUG00000004140 retrocopies