Parental gene:

NUP35, ENSPPYG00000012998

Aliases:None
Description:nucleoporin 35kDa [Source:HGNC Symbol;Acc:29797]
Organism:Orangutan (Pongo abelii)
Coordinates:2b:73591700..73634436(+)


>ENSPPYG00000012998
ATGAAAAGCATTCATAGAAGCACACACTGGTTCGCCACCTTCCCGGTGGAAAAACCCTTTTCTCGGAAATTCTCAGCGCA
AAGACTTTGCCCTATGCCAAAATGGCTCCGGCGCCCACAACTTAAGCAGGGCGCAGGTCCGGAAGTTACGCAACCCCATA
AGGTAGCACGCCCTTACCCGTCGGGAGCGTTTCCGCCATTTTTGAAAATTGGGAAGGTCCTGGTTTTAAGTGTAGTTGCC
GACGCAATGGCAGCCTTTGCCGTGGAACCTCAGGGGCCCGCGTCAGGATCTGAACCAATGATGCTGGGTTCACCCACATC
TCCAAAGCCAGGAGTTAATGCCCAGTTCTTACCTGGATTTTTAATGGGGGATTTGCCAGCTCCGGTGACTCCACAACCTC
GATCAATTAGTGGCCCTTCAGTAGGAGTAATGGAAATGAGATCACCTTTACTTGCAGGTGGGTCACCACCACAACCAGTT
GTACCAGCTCATAAAGATAAAAGTGGCGCTCCACCAGTTAGAAGTATATATGATGACATTTCTAGCCCAGGACTTGGATC
AACACCTTTAACTTCGAGAAGACAGCCAAACATTTCAGTAATGCAGAGTCCTCTTGTTGGAGTTACATCTACTCCTGGAA
CAGGGCAAAGTATGTTTAGTCCAGCAAGTATCGGTCAGCCACGAAAGACGACATTATCTCCTGCCCAGTTGGATCCTTTT
TATACTCAAGGAGATTCTTTGACTTCAGAAGATCACCTCGATGACTCTTGGGTGACTGTATTTGGGTTTCCTCAAGCATC
TGCTTCCTACATATTACTACAATTTGCACAGTATGGAAATATCTTAAAACATGTGATGTCTAATACAGGAAATTGGATGC
ATATTCGTTATCAATCTAAACTGCAGGCTCGGAAAGCCTTAAGCAAAGATGGGAGGATTTTTGGAGAATCCATCATGATT
GGTGTAAAACCATGTATTGACAAAAGTGTTATGGAAAGCAGTGACAGATGTGCTTTATCATCTCCATCTTTAGCCTTTAC
ACCACCAATCAAAACTCTAGGTACACCAACACAACCTGGAAGTACTCCTAGGATTTCTACCATGAGACCTCTTGCTACAG
CATACAAAGCCTCTACTAGTGATTATCAGGTTATTTCTGACAGACAAACGCCAAAAAAAGATGAAAGTCTTGTATCCAAA
GCAATGGAGTACATGTTTGGCTGGTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 4 .31 RPM
SRP007412_cerebellum 4 .62 RPM
SRP007412_heart 3 .13 RPM
SRP007412_kidney 3 .81 RPM
SRP007412_liver 3 .98 RPM



Species Parental gene accession Homology type Retrogenes number
Erinaceus europaeus ENSEEUG00000008469 ortholog_one2one 1 retrogene
retro_eeur_666,
Homo sapiens ENSG00000163002 ortholog_one2one 1 retrogene
retro_hsap_551,
Gorilla gorilla ENSGGOG00000009919 ortholog_one2one 1 retrogene
retro_ggor_500,
Macaca mulatta ENSMMUG00000004140 ortholog_one2one 1 retrogene
retro_mmul_2387,
Nomascus leucogenys ENSNLEG00000006423 ortholog_one2one 1 retrogene
retro_nleu_2019,
Pan troglodytes ENSPTRG00000012711 ortholog_one2one 1 retrogene
retro_ptro_414,
Ictidomys tridecemlineatus ENSSTOG00000000711 ortholog_one2one 2 retrogenes
retro_itri_755, retro_itri_760,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_508 83.76 56.86
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Download FASTA sequences of all ENSPPYG00000012998 retrocopies