Parental gene: | LSM6, ENSMODG00000000526 |
| Aliases: | None |
| Description: | LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae) [Source:HGNC Symbol;Acc:17017] |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 5:132779014..132805327(-) |
>ENSMODG00000000526
ATGAGTCTACGAAAGCAAACTCCAAGTGACTTCCTAAAGCAGATCATAGGAAGACCAGTTGTAGTAAAGTTAAATTCTGG
AGTGGATTACCGAGGTGTCCTGGCTTGCCTGGATGGCTACATGAATATAGCTCTGGAGCAAACAGAAGAATATGTAAATG
GACAACTAAAGAATAAATATGGGGATGCCTTTATTCGAGGAAACAATGTGTTATATATAAGTACACAGAAGAGAAGAATG
TGA
ATGAGTCTACGAAAGCAAACTCCAAGTGACTTCCTAAAGCAGATCATAGGAAGACCAGTTGTAGTAAAGTTAAATTCTGG
AGTGGATTACCGAGGTGTCCTGGCTTGCCTGGATGGCTACATGAATATAGCTCTGGAGCAAACAGAAGAATATGTAAATG
GACAACTAAAGAATAAATATGGGGATGCCTTTATTCGAGGAAACAATGTGTTATATATAAGTACACAGAAGAGAAGAATG
TGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 0 .00 RPM |
| SRP007412_cerebellum | 0 .00 RPM |
| SRP007412_heart | 0 .00 RPM |
| SRP007412_kidney | 0 .00 RPM |
| SRP007412_liver | 0 .00 RPM |
| SRP007412_testis | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000014060 | ortholog_one2one | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000015389 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000009322 | ortholog_one2one | 5 retrogenes | |
| Homo sapiens | ENSG00000164167 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000001310 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000026355 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000008091 | within_species_paralog | 3 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000005584 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000026665 | ortholog_one2many | 1 retrogene | |
| Sus scrofa | ENSSSCG00000009036 | ortholog_one2one | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000012759 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_621 | 87.65 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mdom_1027 | 78.95 | 95.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mdom_1383 | 76.54 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mdom_1983 | 87.65 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000000526 retrocopies