Parental gene: | MAP1LC3A, ENSMODG00000002694 |
| Aliases: | None |
| Description: | microtubule-associated protein 1 light chain 3 alpha [Source:HGNC Symbol;Acc:6838] |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 1:387953298..387955184(+) |
>ENSMODG00000002694
ATGCCCTCCGACCGGCCCTTCAAGCAGCGACGGAGCTTCGCCGACAGATGCAAGGAAGTCCAGCAGATCCGGGAGCAGCA
CCCCAGTAAGATCCCGGTGATTATTGAGCGATACAAAGGGGAAAAACAGCTGCCGGTCCTGGACAAGACCAAGTTCCTAG
TCCCTGACCATGTCAACATGAGTGAATTAGTGAAGATCATCCGCCGCAGACTCCAACTGAATCCCACTCAGGCCTTCTTC
CTCCTGGTAAACCAGCATAGCATGGTCAGTGTCTCCACACCCATCTCAGAGATCTATGAGCAGGAGAAGGATGAAGATGG
CTTCCTCTACATGGTTTATGCCTCCCAAGAGACCTTTGGCTTCTAA
ATGCCCTCCGACCGGCCCTTCAAGCAGCGACGGAGCTTCGCCGACAGATGCAAGGAAGTCCAGCAGATCCGGGAGCAGCA
CCCCAGTAAGATCCCGGTGATTATTGAGCGATACAAAGGGGAAAAACAGCTGCCGGTCCTGGACAAGACCAAGTTCCTAG
TCCCTGACCATGTCAACATGAGTGAATTAGTGAAGATCATCCGCCGCAGACTCCAACTGAATCCCACTCAGGCCTTCTTC
CTCCTGGTAAACCAGCATAGCATGGTCAGTGTCTCCACACCCATCTCAGAGATCTATGAGCAGGAGAAGGATGAAGATGG
CTTCCTCTACATGGTTTATGCCTCCCAAGAGACCTTTGGCTTCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 228 .14 RPM |
| SRP007412_cerebellum | 469 .12 RPM |
| SRP007412_heart | 500 .17 RPM |
| SRP007412_kidney | 255 .47 RPM |
| SRP007412_liver | 306 .62 RPM |
| SRP007412_testis | 84 .07 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Echinops telfairi | ENSETEG00000012407 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000022040 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000017814 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000006158 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_1256 | 66.13 | 51.24 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000002694 retrocopies