Parental gene: | PTPN11, ENSMODG00000003120 |
| Aliases: | None |
| Description: | protein tyrosine phosphatase, non-receptor type 11 [Source:HGNC Symbol;Acc:9644] |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 3:496904743..496973201(-) |
>ENSMODG00000003120
ATGACATCCCGGAGATGGTTTCACCCAAATATCACTGGAGTGGAGGCAGAAAATTTACTGCTGACACGAGGTGTTGATGG
CAGCTTCTTGGCCAGGCCCAGTAAGAGCAATCCAGGAGACTTCACACTTTCTGTTAGGCGGAATGGTGCTGTCACTCACA
TCAAGATTCAGAATACTGGCGACTATTATGACCTGTATGGAGGGGAAAAGTTTGCCACGCTGGCTGAGTTAGTACAGTAT
TACATGGAGCATCATGGACAATTGAAAGAAAAGAATGGTGACGTTATTGAGCTCAAATATCCCCTCAACTGTGCAGATCC
TACCTCGGAAAGGTGGTTTCATGGGCACCTTTCTGGGAAAGAAGCAGAGAAATTATTAACTGAGAAAGGAAAACATGGAA
GCTTCCTCGTGCGGGAAAGCCAGAGCCACCCGGGGGATTTTGTTCTCTCTGTCCGCACGGGGGACGATAAAGGAGAGAGT
AATGATGGCAAATCAAAAGTGACGCACGTCATGATTCGCTGTCAGGATCTGAAATATGATGTTGGTGGAGGAGAGAAGTT
TGACTCTTTAACAGACCTTGTGGAGCATTACAAGAAGAACCCTATGGTAGAAACTTTGGGTACAGTTCTACAGCTCAAGC
AGCCTCTGAATACAACTCGTATCAATGCTGCAGAGATTGAAAGCCGGGTGAGAGAATTAAGCAAATTAGCCGAGACCACA
GATAAAGTTAAACAAGGGTTTTGGGAAGAATTTGAGACTCTTCAACAGCAGGAATGCAAGCTCCTCTATAGTCGTAAAGA
AGGTCAGCGGCAAGAAAATAAAAACAAAAACAGATATAAGAATATTTTGCCCTTTGATCATACCAGGGTTGTCCTACATG
ATGGGGATCCAAATGAACCAGTTTCAGATTATATTAATGCAAATATTATCATGCCTGAATTTGAGACCAAATGCAACAAT
TCAAAACCCAAAAAGAGTTATATTGCAACCCAAGGCTGTCTTCAGAACACAGTGAACGACTTCTGGAGAATGGTGTTCCA
GGAGAATTCACGAGTTATTGTCATGACGACGAAAGAAGTAGAGAGAGGGAAGAGTAAATGTGTCAAGTACTGGCCTGATG
AATATGCTCTAAAGGAATATGGGGCTATGCGCGTTAGGAATGTCAAAGAAAGTGCTGCTCATGACTATACATTACGAGAA
CTAAAACTCTCTAAGGTTGGACAAGGGAACACGGAGCGAACTGTGTGGCAGTACCATTTTAGAACCTGGCCTGATCACGG
TGTGCCCACTGACCCTGGGGGTGTTCTGGACTTTTTAGAAGAGGTCCATCACAAGCAGGAGAGCATTCCTGATGCAGGCC
CTGTGGTGGTGCATTGCAGTGCTGGGATTGGCAGGACAGGAACTTTTATTGTGATTGACATCCTTATTGACATTATCAGA
GAAAAAGGTGTGGATTGTGACATTGATGTTCCCAAGACGATTCAGATGGTGAGATCCCAGAGGTCAGGGATGGTCCAAAC
CGAAGCCCAGTACAGATTTATCTACATGGCTGTGCAGCATTATATTGAGACGCTGCAGCGCAGAATCGAAGAGGAACAGA
AAAGCAAGAGAAAAGGACATGAATATACAAACATTAAATATTCCCTAGCGGACCAGACAACTGGAGATCAGAGTCCTCTA
CTACCCTGCACACCGACTCCAACCTGTCCAGAAATGAGAGAAGATAGTGCTAGAGTATATGAAAATGTGGGATTGGTGCA
GCAGCAGAAAAGTTTTAGATGA
ATGACATCCCGGAGATGGTTTCACCCAAATATCACTGGAGTGGAGGCAGAAAATTTACTGCTGACACGAGGTGTTGATGG
CAGCTTCTTGGCCAGGCCCAGTAAGAGCAATCCAGGAGACTTCACACTTTCTGTTAGGCGGAATGGTGCTGTCACTCACA
TCAAGATTCAGAATACTGGCGACTATTATGACCTGTATGGAGGGGAAAAGTTTGCCACGCTGGCTGAGTTAGTACAGTAT
TACATGGAGCATCATGGACAATTGAAAGAAAAGAATGGTGACGTTATTGAGCTCAAATATCCCCTCAACTGTGCAGATCC
TACCTCGGAAAGGTGGTTTCATGGGCACCTTTCTGGGAAAGAAGCAGAGAAATTATTAACTGAGAAAGGAAAACATGGAA
GCTTCCTCGTGCGGGAAAGCCAGAGCCACCCGGGGGATTTTGTTCTCTCTGTCCGCACGGGGGACGATAAAGGAGAGAGT
AATGATGGCAAATCAAAAGTGACGCACGTCATGATTCGCTGTCAGGATCTGAAATATGATGTTGGTGGAGGAGAGAAGTT
TGACTCTTTAACAGACCTTGTGGAGCATTACAAGAAGAACCCTATGGTAGAAACTTTGGGTACAGTTCTACAGCTCAAGC
AGCCTCTGAATACAACTCGTATCAATGCTGCAGAGATTGAAAGCCGGGTGAGAGAATTAAGCAAATTAGCCGAGACCACA
GATAAAGTTAAACAAGGGTTTTGGGAAGAATTTGAGACTCTTCAACAGCAGGAATGCAAGCTCCTCTATAGTCGTAAAGA
AGGTCAGCGGCAAGAAAATAAAAACAAAAACAGATATAAGAATATTTTGCCCTTTGATCATACCAGGGTTGTCCTACATG
ATGGGGATCCAAATGAACCAGTTTCAGATTATATTAATGCAAATATTATCATGCCTGAATTTGAGACCAAATGCAACAAT
TCAAAACCCAAAAAGAGTTATATTGCAACCCAAGGCTGTCTTCAGAACACAGTGAACGACTTCTGGAGAATGGTGTTCCA
GGAGAATTCACGAGTTATTGTCATGACGACGAAAGAAGTAGAGAGAGGGAAGAGTAAATGTGTCAAGTACTGGCCTGATG
AATATGCTCTAAAGGAATATGGGGCTATGCGCGTTAGGAATGTCAAAGAAAGTGCTGCTCATGACTATACATTACGAGAA
CTAAAACTCTCTAAGGTTGGACAAGGGAACACGGAGCGAACTGTGTGGCAGTACCATTTTAGAACCTGGCCTGATCACGG
TGTGCCCACTGACCCTGGGGGTGTTCTGGACTTTTTAGAAGAGGTCCATCACAAGCAGGAGAGCATTCCTGATGCAGGCC
CTGTGGTGGTGCATTGCAGTGCTGGGATTGGCAGGACAGGAACTTTTATTGTGATTGACATCCTTATTGACATTATCAGA
GAAAAAGGTGTGGATTGTGACATTGATGTTCCCAAGACGATTCAGATGGTGAGATCCCAGAGGTCAGGGATGGTCCAAAC
CGAAGCCCAGTACAGATTTATCTACATGGCTGTGCAGCATTATATTGAGACGCTGCAGCGCAGAATCGAAGAGGAACAGA
AAAGCAAGAGAAAAGGACATGAATATACAAACATTAAATATTCCCTAGCGGACCAGACAACTGGAGATCAGAGTCCTCTA
CTACCCTGCACACCGACTCCAACCTGTCCAGAAATGAGAGAAGATAGTGCTAGAGTATATGAAAATGTGGGATTGGTGCA
GCAGCAGAAAAGTTTTAGATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 0 .00 RPM |
| SRP007412_cerebellum | 0 .00 RPM |
| SRP007412_heart | 0 .00 RPM |
| SRP007412_kidney | 0 .00 RPM |
| SRP007412_liver | 0 .00 RPM |
| SRP007412_testis | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000012464 | possible_ortholog | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000010689 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000013253 | possible_ortholog | 4 retrogenes | |
| Monodelphis domestica | ENSMODG00000021422 | other_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_516 | 84.86 | 59.02 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000003120 retrocopies