Parental gene:

PTPN2, ENSMODG00000021422

Aliases:None
Description:protein tyrosine phosphatase, non-receptor type 2 [Source:HGNC Symbol;Acc:9650]
Organism:Opossum (Monodelphis domestica)
Coordinates:3:280897564..281006123(-)


>ENSMODG00000021422
ATGTCCGATACCATCGAGCGGGAGTTTGAGGAGGTGGATGCTGAGAACCGGTGGCAGCCCATGTACTTGGAAATTCGAAG
TCAGTCCCATGACTACCCTCATAAAGTGGCGAAATCTCTAGAAAATAGAAATCGAAACAGATACAGAGATGTCAGCCCAT
ATGATCATAGTCGTGTTAAACTGCAAAATACTGAAAATGATTATATCAATGCCAGCTTTGTTGCCATAGAAGAGGCACAA
AGAAATTACATCTTAACGCAGGGTCCACTTCCTAATACTTGTTGTCATTTTTGGCTAATGGTTTGGCAGCAAAAGTCCAA
AGCAGTTGTCATGCTAAATCGAATTGTGGAGAAAGATTCAATAAAATGTGCACAATATTGGCCAACCAAAGAAGATAAAG
TGATGGTGTTTGAAGAGACAGGATTCTGTGTGAGGCTAGTGTCAGAAGATGTCAAATCATATTATACAGTTCATCTACTA
AAATTAGAAAATCTTCATAGTGGTGAGATCAGGTTAATATCTCACTTTCATTATACTACATGGCCAGATTTTGGAGTCCC
TCAATCACCAGCTTCATTCCTCAACTTCTTATTTAAAGTTCGAGAATCTGGTTCCCTGAGTGATGAACATGGACCTGCAA
TAATTCATTGTAGTGCAGGCATTGGCCGGTCTGGCACATTTTCATTAGTTGATACTTGTCTTGTCCTGATGGAAAAAAGA
GATGATCCTTTTTCTGTTAATATTAAGCAAGTATTAGTGAATATGAGAAAATTTCGAATGGGACTTATTCAGACTCCAGA
TCAACTAAGATTTTCATATATGGCTGTAATAGAAGGAGCAAAATTTATAATGGGAGACTCAAATATACAGAAGCGGTGGA
AAGAACTATCTAATGAAGACGAGGCACCTAACTATGAACATTCACCACCTCATCCAACTAAAATAATTCCTGGAAAGTAT
AATGGGAATAGGTTAGAGTTAGAAAGTGGCGAAAAAGATGAAAAAATAAACCTTACAGAACTCTCCACCAAGATGCAAGA
TACAGTGACAGAGAGCACTGAAAGTGCTGTTCGGAAGAGATACCGAGAGGACAGAAAAGCTAATACAGCTCAAAAGGTGC
AGCAGATGAAACAGAGGCTAAGTGAGACTGAACGAAAAAGAAAAAGGCCAAGACTGACTGACACCTAA

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000000867 ortholog_one2one 1 retrogene
retro_chof_2231,
Callithrix jacchus ENSCJAG00000005102 ortholog_one2one 1 retrogene
retro_cjac_1577,
Dasypus novemcinctus ENSDNOG00000016588 ortholog_one2one 1 retrogene
retro_dnov_1466,
Erinaceus europaeus ENSEEUG00000005636 ortholog_one2one 1 retrogene
retro_eeur_370,
Echinops telfairi ENSETEG00000005577 ortholog_one2one 2 retrogenes
retro_etel_1743, retro_etel_1942,
Homo sapiens ENSG00000175354 ortholog_one2one 2 retrogenes
retro_hsap_1186, retro_hsap_480,
Gorilla gorilla ENSGGOG00000010259 ortholog_one2many 2 retrogenes
retro_ggor_453, retro_ggor_925,
Loxodonta africana ENSLAFG00000011818 ortholog_one2many 1 retrogene
retro_lafr_701,
Macropus eugenii ENSMEUG00000005156 ortholog_one2one 1 retrogene
retro_meug_653,
Monodelphis domestica ENSMODG00000003120 other_paralog 1 retrogene
retro_mdom_516,
Nomascus leucogenys ENSNLEG00000009074 ortholog_one2one 3 retrogenes
retro_nleu_2112, retro_nleu_351, retro_nleu_894,
Otolemur garnettii ENSOGAG00000028605 ortholog_one2one 1 retrogene
retro_ogar_3429,
Pongo abelii ENSPPYG00000008983 ortholog_one2one 3 retrogenes
retro_pabe_1077, retro_pabe_1144, retro_pabe_989,
Pan troglodytes ENSPTRG00000009884 ortholog_one2one 2 retrogenes
retro_ptro_361, retro_ptro_813,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_1225 79.52 52.66
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Download FASTA sequences of all ENSMODG00000021422 retrocopies