Parental gene:

RPL8, ENSMODG00000004283

Aliases:None
Description:ribosomal protein L8 [Source:HGNC Symbol;Acc:10368]
Organism:Opossum (Monodelphis domestica)
Coordinates:3:432217513..432221304(-)


>ENSMODG00000004283
ATGGGCCGGGTGATTCGTGGTCAGAGGAAGGGTGCGGGCTCCGTCTTCCGAGCTCATGTGAAGCACCGAAAAGGGGCCGC
CAAGCTACGGGCCGTAGACTTCGCTGAGAGGCATGGTTACATCAAGGGTATTGTAAAGGACATAATCCATGATCCAGGTC
GAGGGGCTCCTCTTGCAAAAGTAGCTTTCAGGGATCCATACCGATTTAAAAAGAGGACAGAGTTGTTCATTGCTGCTGAA
GGCATTCATACCGGCCAGTTTGTATACTGTGGTAAGAAAGCTCAACTCAACATTGGCAATGTCCTCCCAGTTGGTACTAT
GCCTGAAGGAACTATTGTGTGCTGTCTTGAAGAAAAGCCTGGTGACCGGGGTAAGCTTGCCCGTGCATCCGGAAACTATG
CTACAGTTATTTCACACAATCCCGAAACCAAGAAAACACGGGTGAAGCTACCTTCAGGCTCTAAGAAAGTGATCTCCTCT
GCAAACAGAGCCATAGTTGGTGTTGTTGCTGGTGGAGGTCGTATTGATAAGCCCATCCTTAAGGCAGGTCGTGCCTACCA
CAAATATAAGGCCAAGAGAAACTGCTGGCCTCGAGTCCGGGGTGTGGCCATGAATCCTGTGGAACATCCCTTCGGAGGAG
GTAATCACCAGCATATTGGAAAACCGTCCACCATTCGAAGAGATGCCCCAGCTGGACGAAAGGTCGGTCTCATCGCTGCC
CGGCGTACTGGTCGACTCCGGGGTACCAAGACTGTACAGGAGAAGGAGAACTAA

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000017933 possible_ortholog 1 retrogene
retro_acar_31,
Bos taurus ENSBTAG00000026327 possible_ortholog 1 retrogene
retro_btau_96,
Callithrix jacchus ENSCJAG00000021388 possible_ortholog 4 retrogenes
retro_cjac_1109, retro_cjac_1169, retro_cjac_1579, retro_cjac_2047,
Macropus eugenii ENSMEUG00000013824 ortholog_one2one 9 retrogenes
retro_meug_1116, retro_meug_1354, retro_meug_1757, retro_meug_1817, retro_meug_1881, retro_meug_670, retro_meug_941, retro_meug_960, retro_meug_974,
Macaca mulatta ENSMMUG00000013379 possible_ortholog 2 retrogenes
retro_mmul_1470, retro_mmul_1531,
Mustela putorius furo ENSMPUG00000006022 possible_ortholog 1 retrogene
retro_mputfur_1517,
Ornithorhynchus anatinus ENSOANG00000002646 possible_ortholog 1 retrogene
retro_oana_93,
Oryctolagus cuniculus ENSOCUG00000024716 possible_ortholog 1 retrogene
retro_ocun_146,
Rattus norvegicus ENSRNOG00000048523 possible_ortholog 2 retrogenes
retro_rnor_122, retro_rnor_239,
Sarcophilus harrisii ENSSHAG00000013568 ortholog_one2one 2 retrogenes
retro_shar_482, retro_shar_558,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_253 89.40 58.75
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2. retro_mdom_1055 89.49 100.00
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3. retro_mdom_1696 66.47 66.15
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Download FASTA sequences of all ENSMODG00000004283 retrocopies