Parental gene: | AIDA, ENSMODG00000004774 |
| Aliases: | None |
| Description: | axin interactor, dorsalization associated [Source:HGNC Symbol;Acc:25761] |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 2:133654540..133700134(-) |
>ENSMODG00000004774
ATGAGGGGCGGCTCATCCCGTGCCGCAAAGTTTGGCTGTGGCGGCAAATGGGCTTGGGCGGCTCCTGAGCGGGCGGTGGC
GGCCACTGAAGCCGTTCCTCGGTGCCCCGCGGATGCCGCGGCTCCAGTCCAAGATCATGGCTCCCTAAAACCGTCGGGCA
GGGGTGGGGTGGGGACGGGACCGGCCATGTCTGAGGTGACCCGGAGTCTCCTGCAGCGCTGGGGCGCCAGCTTCAGGAGG
GGCGCCGACTTCGACTCGTGGGGGCAGCTGGTGGAAGCGATAGACGAGTACCAGATATTAGCAAGACATCTTCAGAAAGA
AGCTCAGGCTCAACATAATTCAGAATTCACAGAAGAGCAAAAGAAGACCATTGGTAAAATTGCAACATGCTTGGAATTAC
GAAGTGCCGCCTTACAGTCCACACAGTCTCAAGATGAATTTAAACTGGAGGACCTGAAAAAACTAGAACCAATCTTAAAG
AATATTCTTACTTATAATAAAGAATTCCCCTTTGATGTACAGCCTGTTCCATTAAGAAGAATTTTAGCACCTGGTGAAGA
AGAGAATTTGGAATTTGAGGATGACGATGAAGAGGGTGGTGCTGGAGCAGGGTCTCCAGACTCCTTCCCTGCTAGAGTTC
CAGGTACTTTATTACCCAGGTTGCCATCTGAACCAGGAATGACGTTACTCACTATCAAAATTGAGAAAATTGGTCTGAAA
GATGCTGGGCAGTGCATTGATCCCTATATTACAGTTAGTGTAAAGGATCTGAATGGCATAGATTTAACCCCTGTGCAAGA
TACTCCTGTGGCTTCAAGGAAGGAGGATACATATGTTCACTTTAATGTGGACATTGAACTTCAGAAACACATTGAAAAGT
TAACCAAAGGTGCAGCTATTTTCTTTGAATTCAAACACTATAAGCCTAAAAAAAGGTTTACCAGCACCAAATGTTTTGCT
TTCATGGAGATGGATGAAATTAAACCTGGGCCAATTATAATAGAACTATACAAGAAACCCACTGACTTTAAAAGAAAGAA
ACTGCAGTTGTTGACCAAGAAACCACTTTATCTTCACCTCCATCAAACTTTGCACAAGGAATGA
ATGAGGGGCGGCTCATCCCGTGCCGCAAAGTTTGGCTGTGGCGGCAAATGGGCTTGGGCGGCTCCTGAGCGGGCGGTGGC
GGCCACTGAAGCCGTTCCTCGGTGCCCCGCGGATGCCGCGGCTCCAGTCCAAGATCATGGCTCCCTAAAACCGTCGGGCA
GGGGTGGGGTGGGGACGGGACCGGCCATGTCTGAGGTGACCCGGAGTCTCCTGCAGCGCTGGGGCGCCAGCTTCAGGAGG
GGCGCCGACTTCGACTCGTGGGGGCAGCTGGTGGAAGCGATAGACGAGTACCAGATATTAGCAAGACATCTTCAGAAAGA
AGCTCAGGCTCAACATAATTCAGAATTCACAGAAGAGCAAAAGAAGACCATTGGTAAAATTGCAACATGCTTGGAATTAC
GAAGTGCCGCCTTACAGTCCACACAGTCTCAAGATGAATTTAAACTGGAGGACCTGAAAAAACTAGAACCAATCTTAAAG
AATATTCTTACTTATAATAAAGAATTCCCCTTTGATGTACAGCCTGTTCCATTAAGAAGAATTTTAGCACCTGGTGAAGA
AGAGAATTTGGAATTTGAGGATGACGATGAAGAGGGTGGTGCTGGAGCAGGGTCTCCAGACTCCTTCCCTGCTAGAGTTC
CAGGTACTTTATTACCCAGGTTGCCATCTGAACCAGGAATGACGTTACTCACTATCAAAATTGAGAAAATTGGTCTGAAA
GATGCTGGGCAGTGCATTGATCCCTATATTACAGTTAGTGTAAAGGATCTGAATGGCATAGATTTAACCCCTGTGCAAGA
TACTCCTGTGGCTTCAAGGAAGGAGGATACATATGTTCACTTTAATGTGGACATTGAACTTCAGAAACACATTGAAAAGT
TAACCAAAGGTGCAGCTATTTTCTTTGAATTCAAACACTATAAGCCTAAAAAAAGGTTTACCAGCACCAAATGTTTTGCT
TTCATGGAGATGGATGAAATTAAACCTGGGCCAATTATAATAGAACTATACAAGAAACCCACTGACTTTAAAAGAAAGAA
ACTGCAGTTGTTGACCAAGAAACCACTTTATCTTCACCTCCATCAAACTTTGCACAAGGAATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 0 .00 RPM |
| SRP007412_cerebellum | 0 .00 RPM |
| SRP007412_heart | 0 .00 RPM |
| SRP007412_kidney | 0 .00 RPM |
| SRP007412_liver | 0 .00 RPM |
| SRP007412_testis | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000007593 | ortholog_one2one | 2 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000010095 | ortholog_one2one | 2 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000008380 | ortholog_one2one | 5 retrogenes | |
| Homo sapiens | ENSG00000186063 | ortholog_one2one | 4 retrogenes | |
| Gorilla gorilla | ENSGGOG00000015289 | ortholog_one2one | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000015025 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000042901 | ortholog_one2one | 3 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000013583 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000017030 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000000196 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000002010 | ortholog_one2one | 3 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000010662 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000005745 | ortholog_one2one | 3 retrogenes | |
| Tursiops truncatus | ENSTTRG00000016594 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_1417 | 97.52 | 54.77 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mdom_1418 | 95.57 | 54.77 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mdom_1448 | 82.83 | 52.32 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000004774 retrocopies