Parental gene: | AIDA, ENSPTRG00000002010 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 1:201934781..201979986(-) |
>ENSPTRG00000002010
ATGTCGGAGGTGACCCGGAGTCTGCTGCAGCGCTGGGGCGCCAGTTTTAGGAGAGGCGCCGACTTCGACTCTTGGGGCCA
GCTGGTGGAGGCGATAGACGAGTATCAGATATTAGCAAGACATCTACAAAAGGAGGCCCAAGCTCAACACAATAATTCTG
AATTCACAGAAGAACAAAAGAAAACCATAGGCAAAATTGCAACATGCTTGGAATTGCGAAGTGCAGCTTTACAGTCCACA
CAGTCTCAAGAAGAATTTAAACTGGAGGACCTGAAGAAGCTAGAACCAATCCTAAAGAATATTCTTACATATAATAAAGA
ATTCCCATTTGATGTTCAGCCTGTCCCATTAAGAAGAATTTTGGCACCTGGTGAAGAAGAGAATTTGGAATTTGAAGAAG
ATGAAGAAGAGGGTGGTGCTGGAGCAGGGTCTCCTGATTCTTTTCCTGCTAGAGTTCCCGGTACTTTATTACCAAGGTTG
CCATCGGAACCAGGAATGACATTACTCACTATCAGAATTGAGAAAATTGGTTTGAAAGATGCTGGGCAGTGCATCGATCC
CTATATTACAGTTAGTGTAAAGGATCTGAATGGCATAGACTTAACTCCTGTGCAAGATACTCCTGTGGCTTCAAGAAAAG
AAGATACATATGTTCATTTTAATGTGGACATTGAGCTCCAGAAGCATGTTGAAAAATTAACTAAAGGTGCAGCTATCTTC
TTTGAATTCAAGCACTACAAGCCTAAAAAAAGGTTTACCAGCACCAAGTGTTTTGCTTTCATGGAGATGGATGAAATTAA
ACCTGGGCCAATTGTAATAGAACTATACAAGAAACCCACTGACTTTAAAAGAAAGAAATTGCAATTATTGACCAAGAAAC
CACTTTATCTTCATCTACATCAAACTTTGCACAAGGAATGA
ATGTCGGAGGTGACCCGGAGTCTGCTGCAGCGCTGGGGCGCCAGTTTTAGGAGAGGCGCCGACTTCGACTCTTGGGGCCA
GCTGGTGGAGGCGATAGACGAGTATCAGATATTAGCAAGACATCTACAAAAGGAGGCCCAAGCTCAACACAATAATTCTG
AATTCACAGAAGAACAAAAGAAAACCATAGGCAAAATTGCAACATGCTTGGAATTGCGAAGTGCAGCTTTACAGTCCACA
CAGTCTCAAGAAGAATTTAAACTGGAGGACCTGAAGAAGCTAGAACCAATCCTAAAGAATATTCTTACATATAATAAAGA
ATTCCCATTTGATGTTCAGCCTGTCCCATTAAGAAGAATTTTGGCACCTGGTGAAGAAGAGAATTTGGAATTTGAAGAAG
ATGAAGAAGAGGGTGGTGCTGGAGCAGGGTCTCCTGATTCTTTTCCTGCTAGAGTTCCCGGTACTTTATTACCAAGGTTG
CCATCGGAACCAGGAATGACATTACTCACTATCAGAATTGAGAAAATTGGTTTGAAAGATGCTGGGCAGTGCATCGATCC
CTATATTACAGTTAGTGTAAAGGATCTGAATGGCATAGACTTAACTCCTGTGCAAGATACTCCTGTGGCTTCAAGAAAAG
AAGATACATATGTTCATTTTAATGTGGACATTGAGCTCCAGAAGCATGTTGAAAAATTAACTAAAGGTGCAGCTATCTTC
TTTGAATTCAAGCACTACAAGCCTAAAAAAAGGTTTACCAGCACCAAGTGTTTTGCTTTCATGGAGATGGATGAAATTAA
ACCTGGGCCAATTGTAATAGAACTATACAAGAAACCCACTGACTTTAAAAGAAAGAAATTGCAATTATTGACCAAGAAAC
CACTTTATCTTCATCTACATCAAACTTTGCACAAGGAATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 34 .89 RPM |
| SRP007412_cerebellum | 38 .47 RPM |
| SRP007412_heart | 51 .79 RPM |
| SRP007412_kidney | 42 .60 RPM |
| SRP007412_liver | 40 .56 RPM |
| SRP007412_testis | 131 .52 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000007593 | ortholog_one2one | 2 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000010095 | ortholog_one2one | 2 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000008380 | ortholog_one2one | 5 retrogenes | |
| Homo sapiens | ENSG00000186063 | ortholog_one2one | 4 retrogenes | |
| Gorilla gorilla | ENSGGOG00000015289 | ortholog_one2one | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000015025 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000004774 | ortholog_one2one | 3 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000013583 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000017030 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000000196 | ortholog_one2one | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000005745 | ortholog_one2one | 3 retrogenes | |
| Tursiops truncatus | ENSTTRG00000016594 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_1254 | 74.84 | 50.33 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_1528 | 94.46 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ptro_2027 | 92.51 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000002010 retrocopies