Parental gene: | STAU1, ENSMODG00000016276 |
| Aliases: | None |
| Description: | staufen double-stranded RNA binding protein 1 [Source:HGNC Symbol;Acc:11370] |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 1:497064264..497126489(+) |
>ENSMODG00000016276
ATGTCTCAAGTTCAAGTTCAGAACCCATCTGCTGCTCTCTCAGGGAGCCAAATACTGAACAAGAACCAGTCTGCTATCTC
ACAGCCTTTGATGAGTATTCCTTCTACTACTAGCTCTCTGCCCTCTGAAAATGCAGGTAGACCTATTCAAAACTCTGCTT
TACCCTCTGCATCTATTACATCCACCAGTGCAGCTGCAGTTCCTTCTAACATGGCAAACCCCAAAGAGAAAACCCCAATG
TGTCTTGTGAATGAGTTAGCCCGTTTCAACAAGATTCAGCCTGAGTATAAGCTTTTGAGTGAGCAAGGTCCAGCTCACTC
TAAGGTGTTTACAGTACAGCTGACACTTGGAGACCAGCATTGGGAAGCTGAAGGAACTAGTATTAAAAAAGCCCAACACT
CAGCTGCTGCCAAAGCTTTGGAGGGAACAAAATTTCCTAAACCAACAGCCCGCCCTATTCGTAACGAAGGAAGGAATCCA
GACAGTGTAACCCCAACAGTGGAACTAAATGCACTTTGCATGAAACTTGGGAAAAAACCAATGTACAAGCCTGTTGATCC
CTACACAAGGATGCAGTCCACCTATAACTATAATATGAGAGGAGGTGCCTATCCCCCACGGTACTTTTACCCATTTCCTG
TCCCACCTTTACTTTATCAAGTTGAACTTTCCATTGGTGGACAACAGTTTAATGGGAAAGGACGAACAAGACAGGCAGCG
AAACATGATGCAGCTGCAAAGGCACTGAAGATCTTGCAACATGAGCCCCTGCCTGAGAAACCAGAGGTGAATGGAAGAGA
ACCAGATGATGAAAATCTAAATAAATCTGAAATAAGCCAAGTGTTTGAGATTGCACTTAAACGGAACTTGCCTGTGAATT
TTGAGGTCACCAGGGAGAGTGGCCCACCTCACATGAAGAGTTTTGTGACAAAGGTGTCAGTTGGTGAATTCATGGGTGAA
GGTGAAGGAAAAAGCAAGAAGATTTCAAAGAAAAATGCTGCTATAGCTGTCCTTGAGGAACTAAAGAAATTACCTCCACT
TCCAACAGTTGAGAAAATGAAGCCACGAATTAAAAAGAAAACGAAATCTATAGTTAAGCTACAGACAAGCCCAGAATATG
GTCAAGGAATGAATCCTATTAGCCGTCTTGCCCAGATCCAACAGGCCAAAAAAGATAAGGAGCCTGAATACATGCTTCTC
ACTGAGCGAGGTCTTCCTCGTCGCAGAGAGTTTGTGATGCAGGTCAAAGTTGGTGGCCATACTGCTGAAGGAATGGGCAC
AAATAAGAAGGTAGCAAAGCGCAATGCAGCTGAAAATATGTTAGAGATCCTAGGTTTCAAAGTCCCCCAAGCCCAGCCCC
CCAAGCCAGCACTAAAGACAGAAGAAAAGACCCCAGTAAAGAAACCAGGTGATGGAAGAAAAGTTACCTTTTTTGAGCCC
AACTCTGGTGATGAAAATGTGACCAGTAATAAGGAAGATGAATTTAGGATGCCTTATCTCAGTCATCAGCAACTTCCAGC
AGGAATTCTTCCCATGGTGCCTGAAGTGGCACAGGCTGTAGGAGTCAATCAAGGACATCATACCAAAGAGTTTACCAGGG
TAGCTCCGAATCCTGCCAAGGCAACTGTCACAGCCATGATTGCTAGAGAGCTATTGTATGGGGGGACCTCCCCAACAGCT
GAGACCATTTTAAAGAATAACATCTCCTCAGGCCATGTCCCCCACGGGCCACTTACCAGACCCTCTGAACAACTGGATTA
CCTTTCCAATGTCCAAGGAATCCAGGTGGAGTACAAAGACTTCCCAAAAAACAACAAGAATGAGTTTGTCTCTCTTATAA
ATTGCTCCTCTCAGCCACCTCTGATCAGCCATGGAATTGGAAAGGATGTGGAATCCTGCCATGACATGGCTGCACTGAAC
ATTTTAAAGTTGCTGTCTGAGTTGGACCAACAAAGTACAGAGATGCCAAGAACAGGAAATGGACCAATGTCTGTGTGTGG
GAGGTGCTGA
ATGTCTCAAGTTCAAGTTCAGAACCCATCTGCTGCTCTCTCAGGGAGCCAAATACTGAACAAGAACCAGTCTGCTATCTC
ACAGCCTTTGATGAGTATTCCTTCTACTACTAGCTCTCTGCCCTCTGAAAATGCAGGTAGACCTATTCAAAACTCTGCTT
TACCCTCTGCATCTATTACATCCACCAGTGCAGCTGCAGTTCCTTCTAACATGGCAAACCCCAAAGAGAAAACCCCAATG
TGTCTTGTGAATGAGTTAGCCCGTTTCAACAAGATTCAGCCTGAGTATAAGCTTTTGAGTGAGCAAGGTCCAGCTCACTC
TAAGGTGTTTACAGTACAGCTGACACTTGGAGACCAGCATTGGGAAGCTGAAGGAACTAGTATTAAAAAAGCCCAACACT
CAGCTGCTGCCAAAGCTTTGGAGGGAACAAAATTTCCTAAACCAACAGCCCGCCCTATTCGTAACGAAGGAAGGAATCCA
GACAGTGTAACCCCAACAGTGGAACTAAATGCACTTTGCATGAAACTTGGGAAAAAACCAATGTACAAGCCTGTTGATCC
CTACACAAGGATGCAGTCCACCTATAACTATAATATGAGAGGAGGTGCCTATCCCCCACGGTACTTTTACCCATTTCCTG
TCCCACCTTTACTTTATCAAGTTGAACTTTCCATTGGTGGACAACAGTTTAATGGGAAAGGACGAACAAGACAGGCAGCG
AAACATGATGCAGCTGCAAAGGCACTGAAGATCTTGCAACATGAGCCCCTGCCTGAGAAACCAGAGGTGAATGGAAGAGA
ACCAGATGATGAAAATCTAAATAAATCTGAAATAAGCCAAGTGTTTGAGATTGCACTTAAACGGAACTTGCCTGTGAATT
TTGAGGTCACCAGGGAGAGTGGCCCACCTCACATGAAGAGTTTTGTGACAAAGGTGTCAGTTGGTGAATTCATGGGTGAA
GGTGAAGGAAAAAGCAAGAAGATTTCAAAGAAAAATGCTGCTATAGCTGTCCTTGAGGAACTAAAGAAATTACCTCCACT
TCCAACAGTTGAGAAAATGAAGCCACGAATTAAAAAGAAAACGAAATCTATAGTTAAGCTACAGACAAGCCCAGAATATG
GTCAAGGAATGAATCCTATTAGCCGTCTTGCCCAGATCCAACAGGCCAAAAAAGATAAGGAGCCTGAATACATGCTTCTC
ACTGAGCGAGGTCTTCCTCGTCGCAGAGAGTTTGTGATGCAGGTCAAAGTTGGTGGCCATACTGCTGAAGGAATGGGCAC
AAATAAGAAGGTAGCAAAGCGCAATGCAGCTGAAAATATGTTAGAGATCCTAGGTTTCAAAGTCCCCCAAGCCCAGCCCC
CCAAGCCAGCACTAAAGACAGAAGAAAAGACCCCAGTAAAGAAACCAGGTGATGGAAGAAAAGTTACCTTTTTTGAGCCC
AACTCTGGTGATGAAAATGTGACCAGTAATAAGGAAGATGAATTTAGGATGCCTTATCTCAGTCATCAGCAACTTCCAGC
AGGAATTCTTCCCATGGTGCCTGAAGTGGCACAGGCTGTAGGAGTCAATCAAGGACATCATACCAAAGAGTTTACCAGGG
TAGCTCCGAATCCTGCCAAGGCAACTGTCACAGCCATGATTGCTAGAGAGCTATTGTATGGGGGGACCTCCCCAACAGCT
GAGACCATTTTAAAGAATAACATCTCCTCAGGCCATGTCCCCCACGGGCCACTTACCAGACCCTCTGAACAACTGGATTA
CCTTTCCAATGTCCAAGGAATCCAGGTGGAGTACAAAGACTTCCCAAAAAACAACAAGAATGAGTTTGTCTCTCTTATAA
ATTGCTCCTCTCAGCCACCTCTGATCAGCCATGGAATTGGAAAGGATGTGGAATCCTGCCATGACATGGCTGCACTGAAC
ATTTTAAAGTTGCTGTCTGAGTTGGACCAACAAAGTACAGAGATGCCAAGAACAGGAAATGGACCAATGTCTGTGTGTGG
GAGGTGCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 631 .86 RPM |
| SRP007412_cerebellum | 678 .37 RPM |
| SRP007412_heart | 607 .23 RPM |
| SRP007412_kidney | 812 .49 RPM |
| SRP007412_liver | 504 .50 RPM |
| SRP007412_testis | 328 .44 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000016233 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000027444 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_1931 | 80.95 | 56.05 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000016276 retrocopies