Parental gene: | STAU1, ENSSSCG00000027444 |
| Aliases: | None |
| Description: | staufen double-stranded RNA binding protein 1 [Source:HGNC Symbol;Acc:11370] |
| Organism: | Pig (Sus scrofa) |
| Coordinates: | 17:57265245..57282086(-) |
>ENSSSCG00000027444
GTGAATGGAAGAGAATCAGAAGAAGAAAATCTCAATAAATCTGAAATAAGTCAAGTGTTTGAGATTGCGCTTAAACGGAA
CTTGCCTGTGAATTTTGAGGTCGCCCGGGAGAGTGGCCCACCCCACATGAAGAGCTTTGTGACCAGGGTGTCAGTTGGGG
AGTTTGTAGGGGAAGGTGAAGGGAAGAGCAAGAAGATTTCAAAGAAAAACGCTGCTATAGCTGTTCTTGAGGAGCTGAAG
AAGTTACCACCTCTGCCTACAGTGGAGCGAGTGAAGCCCAGAATCAAAAAGAAAACAAAGTCTATAGTCAGGTTACAGAG
CACCCAGGAGTATGGCCAGGGGATGAACCCCATTAGCAGACTGGCCCAGATCCAGCAGGCGAAAAAGGAGAAGGAGCCGG
AGTACCTGCTCCTCACCGAGCGAGGCCTCCCGCGCCGCCGGGAGTTTGTGATGCAGGTGAAGGTGGGAAACCACACTGCA
GAAGGATCCGGCACCAATAAGAAGGTGGCGAAACGCAATGCAGCCGAGAACATGCTGGAGATCCTTGGTTTCAAAGTCCC
ACAGGCTCAGCCCACCAAACCAGCCCTCAAATCCGAGGAGAAGACACCCATAAAGAAACCAGGGGATGGAAGAAAAGTAA
CCTTTTTTGAACCTGGCTCTGGGGATGAAAACGGGACTAGCAATAAAGAGGACGAGTTTAGGATGCCTTATCTTAGTCAT
CAGCAGCTGCCTGCTGGAATTCTTCCCATGGTGCCTGAGGTTGCCCAGGCCGTAGGGGTCAGTCAAGGACATCACACCAA
AGACTTCACAAGGGTGGCTCCAAATCCTGCCAAGGCCACGGTAACTGCCATGATAGCCCGTGAATTGTTGTATGGGGGCA
CCTCGCCTACAGCCGAGACCATTTTAAAGAATAACATCTCTTCAGGCCACGTACCCCATGGACCCCTCACGAGACCGTCC
GAGCAGCTGGACTATCTCTCCAGAGTCCAGGGATTCCAGGTTGAATACAAAGACTTCCCCAAAAACAACAAGAACGAATT
TGTATCTCTTATCAACTGCTCCTCTCAGCCGCCCCTGATCAGCCATGGTATTGGAAAGGATGTGGAGTCCTGCCACGACA
TGGCTGCACTGAACATTTTAAAGTTGCTGTCTGAGTTGGACCAACAAAATACAGAGATGCCAAGAACAGGAAATGGACCA
ATGTCTGTGTGTGGGAGGTGCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP014902_placenta | 68 .36 RPM |
| SRP014902_testis | 98 .16 RPM |
| SRP018288_heart | 55 .66 RPM |
| SRP018288_kidney | 117 .71 RPM |
| SRP018288_liver | 87 .31 RPM |
| SRP018288_lung | 116 .59 RPM |
| SRP018856_adipose | 118 .34 RPM |
| SRP035408_brain | 68 .60 RPM |
| SRP035408_liver | 115 .93 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000016233 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000016276 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sscr_233 | 70.70 | 99.51 | Please wait, loading  |
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Download FASTA sequences of all ENSSSCG00000027444 retrocopies