Parental gene: | COMMD7, ENSMODG00000019450 |
| Aliases: | None |
| Description: | COMM domain containing 7 [Source:HGNC Symbol;Acc:16223] |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 1:400671545..400700527(+) |
>ENSMODG00000019450
ATGGGCGGACCTGAATATACCCCCACACTCAAGACACTGGCTAGCTGGCAGTTTGCAGCACTGACCGAAGTGATTTTCTA
TTTCTTGGTTCAACCCAAGGAGGTTGAAACATTCCTGGCTAAATTGTCTGATTTTGCTGTCACCAATCAGATCAGTCTTG
GGCCCTTAAAGAATATTGTGAAAAGCCTTCTCCTAGTGCCCAATGGTGCCTTGAAGAAGAATATGACTGCTGAGCAGGTC
AGAGCAGATTTCATTACTCTGGGACTCGGTGAAGAGAAAGCCACTTATTTTTCTGAGAAGTGGAAGCAGAAATCTCCCAT
ACTTGCACGATGGGCAATAGGACAGACATTGATGATCAACCAGCTTATAGATATGGAATGGAAATTTGGAGTGACATCAG
GGAGCAGTGAACTGCAGAAAGTTGGGAGTATTTTTTTACAATTGAAGCTGGTGGTTAAAAAAGGAAACCAGACTGAAAAC
GTGTATATAGAGTTAACCCTGCCTCAATTCTATAACTTCCTGAGTGAGATGGAACGTGTCCGAGCCAGCATGGAGTGTTT
CTGCTGA
ATGGGCGGACCTGAATATACCCCCACACTCAAGACACTGGCTAGCTGGCAGTTTGCAGCACTGACCGAAGTGATTTTCTA
TTTCTTGGTTCAACCCAAGGAGGTTGAAACATTCCTGGCTAAATTGTCTGATTTTGCTGTCACCAATCAGATCAGTCTTG
GGCCCTTAAAGAATATTGTGAAAAGCCTTCTCCTAGTGCCCAATGGTGCCTTGAAGAAGAATATGACTGCTGAGCAGGTC
AGAGCAGATTTCATTACTCTGGGACTCGGTGAAGAGAAAGCCACTTATTTTTCTGAGAAGTGGAAGCAGAAATCTCCCAT
ACTTGCACGATGGGCAATAGGACAGACATTGATGATCAACCAGCTTATAGATATGGAATGGAAATTTGGAGTGACATCAG
GGAGCAGTGAACTGCAGAAAGTTGGGAGTATTTTTTTACAATTGAAGCTGGTGGTTAAAAAAGGAAACCAGACTGAAAAC
GTGTATATAGAGTTAACCCTGCCTCAATTCTATAACTTCCTGAGTGAGATGGAACGTGTCCGAGCCAGCATGGAGTGTTT
CTGCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 131 .71 RPM |
| SRP007412_cerebellum | 164 .53 RPM |
| SRP007412_heart | 100 .47 RPM |
| SRP007412_kidney | 176 .46 RPM |
| SRP007412_liver | 126 .88 RPM |
| SRP007412_testis | 64 .23 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000008561 | ortholog_one2one | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000008789 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000010627 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000006762 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000006640 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_313 | 78.00 | 53.19 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mdom_890 | 55.30 | 70.21 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mdom_1047 | 55.81 | 65.96 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000019450 retrocopies