Parental gene:

Tubb1, ENSMUSG00000016255

Aliases:None
Description:tubulin, beta 1 class VI [Source:MGI Symbol;Acc:MGI:107814]
Organism:Mouse (Mus musculus)
Coordinates:2:174450694..174457882(+)


>ENSMUSG00000016255
ATGAGAGAGATCGTGCACATCCAGATTGGCCAGTGTGGCAACCAGATCGGAGCCAAGTTCTGGGAGGTGATCGGGGAAGA
ACATGGGATTGACTGCGCTGGGAGCTACTGTGGGACGTCTGCTCTCCAGCTGGAGAGGATCAGCGTTTACTACAACGAAG
CCTACGGTAAGAAGTATGTGCCGCGAGCCGTCCTTGTGGACCTGGAACCCGGGACAATGGACAGCATCCGATCCAGCAGA
TTGGGAGTCCTCTTTCAGCCTGACAGTTTTGTTCATGGTAACTCTGGTGCTGGTAACAACTGGGCGAAGGGCCACTACAC
AGAGGGAGCGGAGCTGATCGAAAATGTCATGGATGTGGTAAGGAGGGAGAGCGAGAGCTGCGACTGCCTACAGGGTTTCC
AGATCGTGCATTCTCTGGGTGGAGGCACGGGCTCAGGCATGGGCACCCTGCTCATGAACAAGATCAGGGAGGAGTACCCG
GATCGGATCTTGAACTCCTTTAGCGTCATGCCATCACCCAAGGTATCAGACACGGTGGTAGAGCCCTACAATGCCGTGCT
ATCCATCCACCAGCTGATAGAGAACACAGATGCCTGCTTCTGCATCGACAACGAAGCGCTCTATGACATTTGTTTCCGCA
CCCTGAGGCTGACGACACCCACCTACGGGGATCTCAACCACCTGGTGTCCTTGACCATGAGCGGAATCACGACTTCACTG
CGCTTTCCCGGTCAGCTCAATGCAGACCTGCGCAAGCTGGCCGTGAATATGGTGCCCTTTCCTCGTCTTCACTTCTTCAT
GCCTGGCTTCGCTCCACTCACAGCCCAGGGTAGCCAGCAGTACCGAGCCCTCTCAGTAGCGGAGCTCACCCAACAGATGT
TCGATGCCCGCAACATCATGGCTGCCTGTGACCCTCGCCGCGGCCGCTACCTGACTGTGGCTTGTATATTCCGGGGTAAG
ATGTCCACCAAGGAAGTGGACCAACAGCTGCTGTCCATTCAGACAAGGAACAGCAACTGCTTTGTGGAATGGATTCCCAA
CAATGTCAAGGTAGCTGTGTGTGACATCCCGCCCCGTGGGCTGAACATGGCAGCTACCTTCCTGGGCAACAATACAGCCA
TCCAAGAGCTCTTCACCAGGGTCTCTGAGCACTTCTCAGCTATGTTCAGAAGGAGAGCTTTTGTGCACTGGTACACCAGT
GAAGGGATGGACATAAGTGAATTTGGGGAAGCTGAGAGTGATATCCATGACCTGGTGTCTGAGTACCAACAATTCCAAGA
TGTCAGAGCAGGGCTAGAGGACAGTGAAGAGGATGTGGAGGAGGCAGAGGTGGAGGCAGAAGACAAAGATCATTAG

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .09 RPM
SRP007412_heart 6 .10 RPM
SRP007412_kidney 0 .33 RPM
SRP007412_liver 0 .38 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000010101 possible_ortholog 1 retrogene
retro_cjac_800,
Callithrix jacchus ENSCJAG00000011697 possible_ortholog 1 retrogene
retro_cjac_3284,
Dipodomys ordii ENSDORG00000015889 possible_ortholog 1 retrogene
retro_dord_254,
Homo sapiens ENSG00000173213 possible_ortholog 1 retrogene
retro_hsap_3733,
Homo sapiens ENSG00000173876 possible_ortholog 1 retrogene
retro_hsap_3944,
Mus musculus ENSMUSG00000036752 other_paralog 2 retrogenes
retro_mmus_158, retro_mmus_422,
Pongo abelii ENSPPYG00000011180 ortholog_one2one 1 retrogene
retro_pabe_3250,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_1109 75.26 86.47
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Download FASTA sequences of all ENSMUSG00000016255 retrocopies