Parental gene:

Ccng1, ENSMUSG00000020326

Aliases:Ccng1, AI314029
Description:cyclin G1 [Source:MGI Symbol;Acc:MGI:102890]
Organism:Mouse (Mus musculus)
Coordinates:11:40748551..40755311(-)


>ENSMUSG00000020326
ATGATAGAAGTACTGACAACTGACTCTCAGAAACTGCTACACCAGCTGAACACCCTGTTGGAACAGGAGTCTAGATGTCA
GCCAAAGGTCTGCGGCTTGAAACTAATTGAGTCGGCCCATGATAATGGCCTCAGAATGACTGCAAGATTACGGGACTTTG
AAGTAAAAGATCTACTTAGTCTAACTCAGTTCTTTGGCTTTGACACGGAGACATTTTCCCTAGCTGTGAATTTACTGGAC
AGATTCTTGTCTAAAATGAAGGTACAGGCGAAGCATCTTGGGTGTGTTGGACTGAGCTGCTTTTATTTGGCTGTGAAAGC
GACTGAAGAGGAAAGGAATGTCCCACTGGCGACTGATTTGATCCGAATAAGTCAGTATAGGTTCACGGTTTCAGACCTGA
TGAGAATGGAGAAGATTGTGTTGGAGAAAGTGTGTTGGAAAGTCAAAGCTACTACTGCCTTTCAATTTCTGCAGCTCTAT
TATTCACTCGTTCACGACACCTTGCCATTTGAGAGGAGAAACGATCTGAATTTTGAAAGACTAGAAGCCCAACTTAAGGC
CTGCCACTGCAGGATCATATTTTCTAAGGCAAAGCCTTCTGTGCTGGCGCTATCTATCCTTGCGTTGGAGATCCAAGCAC
TGAAATACGTAGAGTTAACAGAAGGAGTAGAATGTATTCAGAAACATTCCAAGATAAGTGGCCGAGATTTGACCTTCTGG
CAAGAGCTTGTTTCCAAGTGTTTAACTGAATATTCATCAAACAAGTGCTCCAAACCTAACGGTCAGAAGTTGAAATGGAT
TGTGTCTGGACGCACTGCACGGCAACTGAAGCACAGTTATTATAGAATAACTCACCTCCCAACGATTCCTGAGACCATTT
GTTAG

Library Parental gene expression (RPM)
SRP007412_brain 62 .82 RPM
SRP007412_cerebellum 32 .31 RPM
SRP007412_heart 585 .37 RPM
SRP007412_kidney 149 .24 RPM
SRP007412_liver 22 .88 RPM
SRP007412_testis 5 .03 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000006607 ortholog_one2one 2 retrogenes
retro_btau_1064, retro_btau_763,
Canis familiaris ENSCAFG00000017207 ortholog_one2one 1 retrogene
retro_cfam_1657,
Callithrix jacchus ENSCJAG00000015341 ortholog_one2many 1 retrogene
retro_cjac_2319,
Cavia porcellus ENSCPOG00000000880 ortholog_one2one 1 retrogene
retro_cpor_771,
Dasypus novemcinctus ENSDNOG00000015166 ortholog_one2one 1 retrogene
retro_dnov_1275,
Dipodomys ordii ENSDORG00000014293 ortholog_one2one 1 retrogene
retro_dord_486,
Equus caballus ENSECAG00000018880 ortholog_one2one 1 retrogene
retro_ecab_152,
Felis catus ENSFCAG00000027366 ortholog_one2one 1 retrogene
retro_fcat_763,
Myotis lucifugus ENSMLUG00000001667 ortholog_one2one 1 retrogene
retro_mluc_1341,
Monodelphis domestica ENSMODG00000007651 ortholog_one2one 1 retrogene
retro_mdom_1018,
Mus musculus ENSMUSG00000063015 within_species_paralog 2 retrogenes
retro_mmus_1211, retro_mmus_2730,
Oryctolagus cuniculus ENSOCUG00000002129 ortholog_one2many 3 retrogenes
retro_ocun_1287, retro_ocun_512, retro_ocun_615,
Otolemur garnettii ENSOGAG00000007639 ortholog_one2one 1 retrogene
retro_ogar_2452,
Pongo abelii ENSPPYG00000016016 ortholog_one2one 1 retrogene
retro_pabe_3373,
Pteropus vampyrus ENSPVAG00000017902 ortholog_one2one 1 retrogene
retro_pvam_1027,
Sarcophilus harrisii ENSSHAG00000007465 ortholog_one2one 2 retrogenes
retro_shar_328, retro_shar_490,
Vicugna pacos ENSVPAG00000008340 ortholog_one2one 1 retrogene
retro_vpac_351,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_1534 52.51 59.52
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Download FASTA sequences of all ENSMUSG00000020326 retrocopies