Parental gene:

Psip1, ENSMUSG00000028484

Aliases:Psip1, AA408851, AU015605, Dfs70, Ledgfa, Ledgfb, Psip2
Description:PC4 and SFRS1 interacting protein 1 [Source:MGI Symbol;Acc:MGI:2142116]
Organism:Mouse (Mus musculus)
Coordinates:4:83455679..83486459(-)


>ENSMUSG00000028484
ATGACTCGCGATTTCAAACCTGGAGACCTCATCTTCGCCAAGATGAAAGGTTATCCTCATTGGCCAGCTCGAGTAGATGA
AGTTCCTGATGGAGCTGTAAAACCACCCACAAACAAACTACCCATTTTCTTTTTTGGAACCCATGAGACTGCTTTTTTAG
GACCAAAGGACATATTTCCTTATTCAGAAAATAAGGAAAAGTATGGCAAACCAAATAAACGGAAAGGTTTTAATGAAGGA
TTGTGGGAGATAGATAACAATCCGAAAGTGAAATTTTCAAGTCAACAGGCATCAACTAAACAATCCAATGCATCGTCTGA
TGTTGAAGTGGAAGAAAAAGAGACTAACGTTTCAAAGGAAGACACTGATCAGGAAGAAAAGGCCAGCAATGAGGATGTGA
CTAAAGCAGTTGACATAACCACTCCAAAAGCTGCCAGGCGAGGAAGAAAGAGAAAGGCTGAAAAACAAGTAGACACTGAA
GAGGCGGGAATGGTGACTGCAGCAACCGCTTCTAATGTGAAAGCAAGTCCTAAGAGAGGACGACCTGCAGCTACTGAAGT
CAAGATTCCCAAACCAAGAGGCAGACCTAAAGTGGTAAAGCAGCCTTGTCCTTCAGACGGTGACATGGTTATTGATGAAG
ATAAAAGTAAAAAAAAGGGACCAGAGGAGAAACAACCTAAAAAGCAGCTTAAAAAAGAGGAAGAAGGCCAAAAGGAAGAA
GAGAAGCCAAGAAAAGAACCAGATAAGAAAGAAGGGAAGAAAGAAGTTGAATCTAAACGGAAAAATTTAGCTAAACCAGG
GGTTACATCAACCTCTGATTCAGAAGACGAAGACGATCAAGAGGGTGAAAAGAAGAGAAAGGGTGGAAGGAACTTCCAGG
CTGCTCACAGGAGGAACATGCTAAAAGGCCAACATGAGAAAGAAGCTGGAGATCGGAAACGCAAGCAGGAGGAACAAATG
GAAACTGAGCAGCAGAATAAAGATGAAGGAAAGAAGCCAGAAGTTAAGAAAGTGGAGAAGAAGCGAGAAACATCAATGGA
TTCTCGACTTCAAAGGATACATGCTGAAATTAAAAATTCACTCAAAATTGATAATCTAGACGTGAACAGATGCATAGAGG
CCCTGGATGAACTCGCTTCACTTCAGGTAACAATGCAGCAAGCTCAGAAACACACAGAGATGATCACAACCCTGAAGAAA
ATACGGCGGTTCAAAGTCAGTCAAGTTATCATGGAAAAGTCTACAATGTTATATAACAAGTTTAAGAATATGTTTTTGGT
TGGTGAAGGAGATTCAGTCATCACCCAAGTGCTGAACAAATCTCTTGCTGAACAGAGACAGCATGAGGAAGCAAATAAAA
CCAAAGATCAGGGGAAGAAAGGGCCAAACAAAAAGCTAGAGAAGGAACCAACAGGTACGAAGAGCCTAAATGGTGGATCT
GATGCTCAAGAGAGTAATCATCCACAGCATAATGGTGATAGTAACGAAGACGGCAAAGACAGCCGCGAGGCCAGCAGTAA
GACAAAGCCACCTGGAGAAGAGAGAGAGGCTGAAATATCTCTGAAAGAGTCTACACTAGATAACTAG

Library Parental gene expression (RPM)
SRP007412_brain 125 .58 RPM
SRP007412_cerebellum 114 .89 RPM
SRP007412_heart 13 .82 RPM
SRP007412_kidney 19 .00 RPM
SRP007412_liver 13 .95 RPM
SRP007412_testis 216 .12 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000012471 ortholog_one2one 1 retrogene
retro_cjac_4069,
Homo sapiens ENSG00000164985 ortholog_one2one 1 retrogene
retro_hsap_4136,
Mus musculus ENSMUSG00000004897 within_species_paralog 1 retrogene
retro_mmus_3647,
Pan troglodytes ENSPTRG00000020786 ortholog_one2one 1 retrogene
retro_ptro_2811,
Tupaia belangeri ENSTBEG00000000715 ortholog_one2one 1 retrogene
retro_tbel_364,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_2896 93.09 51.89
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Download FASTA sequences of all ENSMUSG00000028484 retrocopies